Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.91■□□□□ 0.14
CDC42P60953 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDC42P60953 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDC42P60953 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDC42P60953 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDC42P60953 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDC42P60953 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDC42P60953 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.9■□□□□ 0.14
CDC42P60953 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 UBE2SP1-201ENST00000450587 669 ntBASIC15.9■□□□□ 0.14
CDC42P60953 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDC42P60953 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.9■□□□□ 0.14
CDC42P60953 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 AC092053.1-201ENST00000605787 1936 ntBASIC15.9■□□□□ 0.14
CDC42P60953 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC42P60953 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC42P60953 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
CDC42P60953 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
CDC42P60953 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CDC42P60953 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.89■□□□□ 0.13
CDC42P60953 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC42P60953 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC42P60953 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.89■□□□□ 0.13
CDC42P60953 RBM17P1-201ENST00000453646 1190 ntBASIC15.89■□□□□ 0.13
CDC42P60953 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 FITM1-202ENST00000559294 800 ntBASIC15.89■□□□□ 0.13
CDC42P60953 AC142381.4-202ENST00000563973 229 ntBASIC15.89■□□□□ 0.13
CDC42P60953 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 NEK4P2-201ENST00000580004 1012 ntBASIC15.89■□□□□ 0.13
CDC42P60953 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.89■□□□□ 0.13
CDC42P60953 AC024563.2-201ENST00000603282 481 ntBASIC15.89■□□□□ 0.13
CDC42P60953 AC009154.2-201ENST00000621177 724 ntBASIC15.89■□□□□ 0.13
CDC42P60953 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 AC008741.2-201ENST00000612792 3115 ntBASIC15.89■□□□□ 0.13
CDC42P60953 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC42P60953 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC42P60953 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 AC026691.1-201ENST00000602502 2017 ntBASIC15.89■□□□□ 0.13
CDC42P60953 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDC42P60953 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC42P60953 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC42P60953 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDC42P60953 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms