Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PSMD4P55036 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PSMD4P55036 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PSMD4P55036 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.18■□□□□ 0.18
PSMD4P55036 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 AC003669.1-201ENST00000334569 611 ntBASIC16.18■□□□□ 0.18
PSMD4P55036 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.18■□□□□ 0.18
PSMD4P55036 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 MIR5100-201ENST00000579544 119 ntBASIC16.18■□□□□ 0.18
PSMD4P55036 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.18■□□□□ 0.18
PSMD4P55036 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.18■□□□□ 0.18
PSMD4P55036 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.18■□□□□ 0.18
PSMD4P55036 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.18■□□□□ 0.18
PSMD4P55036 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
PSMD4P55036 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.18■□□□□ 0.18
PSMD4P55036 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PSMD4P55036 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.18■□□□□ 0.18
PSMD4P55036 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 AL356309.3-201ENST00000624132 1934 ntBASIC16.17■□□□□ 0.18
PSMD4P55036 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PSMD4P55036 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.17■□□□□ 0.18
PSMD4P55036 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.17■□□□□ 0.18
PSMD4P55036 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PSMD4P55036 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PSMD4P55036 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PSMD4P55036 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.17■□□□□ 0.18
PSMD4P55036 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.17■□□□□ 0.18
PSMD4P55036 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.17■□□□□ 0.18
PSMD4P55036 FOSL1P1-201ENST00000511041 816 ntBASIC16.17■□□□□ 0.18
PSMD4P55036 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.17■□□□□ 0.18
PSMD4P55036 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 AD001527.2-201ENST00000622994 785 ntBASIC16.17■□□□□ 0.18
PSMD4P55036 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.17■□□□□ 0.18
PSMD4P55036 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.17■□□□□ 0.18
PSMD4P55036 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PSMD4P55036 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.16■□□□□ 0.18
PSMD4P55036 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PSMD4P55036 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.16■□□□□ 0.18
PSMD4P55036 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.16■□□□□ 0.18
PSMD4P55036 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PSMD4P55036 AC141586.5-201ENST00000624546 2050 ntBASIC16.16■□□□□ 0.18
PSMD4P55036 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PSMD4P55036 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.16■□□□□ 0.18
PSMD4P55036 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.16■□□□□ 0.18
PSMD4P55036 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms