Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMLP26374 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMLP26374 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.91■□□□□ 0.94
CHMLP26374 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMLP26374 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHMLP26374 HCG4P8-203ENST00000443049 980 ntBASIC20.91■□□□□ 0.94
CHMLP26374 SIGLEC30P-201ENST00000455569 941 ntBASIC20.91■□□□□ 0.94
CHMLP26374 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.91■□□□□ 0.94
CHMLP26374 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.91■□□□□ 0.94
CHMLP26374 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMLP26374 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMLP26374 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHMLP26374 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMLP26374 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CHMLP26374 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMLP26374 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMLP26374 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMLP26374 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHMLP26374 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.9■□□□□ 0.94
CHMLP26374 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHMLP26374 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMLP26374 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHMLP26374 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 AC124947.2-201ENST00000547118 1133 ntBASIC20.9■□□□□ 0.94
CHMLP26374 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMLP26374 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHMLP26374 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 AL732292.2-201ENST00000609649 430 ntBASIC20.9■□□□□ 0.94
CHMLP26374 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHMLP26374 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMLP26374 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.89■□□□□ 0.94
CHMLP26374 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 FRMD8P1-201ENST00000440433 1524 ntBASIC20.89■□□□□ 0.94
CHMLP26374 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMLP26374 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CHMLP26374 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.89■□□□□ 0.93
CHMLP26374 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.89■□□□□ 0.93
CHMLP26374 AC106795.1-205ENST00000512851 1056 ntBASIC20.89■□□□□ 0.93
CHMLP26374 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMLP26374 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.89■□□□□ 0.93
CHMLP26374 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 MIR3652-201ENST00000579335 131 ntBASIC20.89■□□□□ 0.93
CHMLP26374 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
CHMLP26374 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CHMLP26374 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CHMLP26374 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMLP26374 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMLP26374 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMLP26374 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMLP26374 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CHMLP26374 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.88■□□□□ 0.93
CHMLP26374 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMLP26374 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHMLP26374 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CHMLP26374 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.88■□□□□ 0.93
CHMLP26374 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.88■□□□□ 0.93
CHMLP26374 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMLP26374 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMLP26374 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMLP26374 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMLP26374 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMLP26374 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms