Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 GRK6P1-201ENST00000400595 1711 ntBASIC13.95□□□□□ -0.18
APOC3P02656 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.95□□□□□ -0.18
APOC3P02656 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
APOC3P02656 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
APOC3P02656 AC046185.3-201ENST00000623228 1824 ntBASIC13.94□□□□□ -0.18
APOC3P02656 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 HTR7P1-201ENST00000538670 1336 ntBASIC13.94□□□□□ -0.18
APOC3P02656 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOC3P02656 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 MCRIP2P1-201ENST00000394346 511 ntBASIC13.94□□□□□ -0.18
APOC3P02656 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
APOC3P02656 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC3P02656 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC3P02656 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 AC005089.1-201ENST00000619486 2241 ntBASIC13.94□□□□□ -0.18
APOC3P02656 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
APOC3P02656 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC3P02656 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC3P02656 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
APOC3P02656 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOC3P02656 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
APOC3P02656 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 AC239859.2-201ENST00000444165 318 ntBASIC13.93□□□□□ -0.18
APOC3P02656 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 YBX1P10-201ENST00000444752 975 ntBASIC13.93□□□□□ -0.18
APOC3P02656 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC3P02656 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.93□□□□□ -0.18
APOC3P02656 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.93□□□□□ -0.18
APOC3P02656 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.93□□□□□ -0.18
APOC3P02656 LINC01451-201ENST00000623792 534 ntBASIC13.93□□□□□ -0.18
APOC3P02656 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC3P02656 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
APOC3P02656 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC3P02656 AC099343.3-201ENST00000605834 2503 ntBASIC13.93□□□□□ -0.18
APOC3P02656 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC3P02656 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC3P02656 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC3P02656 AC100803.2-201ENST00000562459 1963 ntBASIC13.92□□□□□ -0.18
APOC3P02656 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC3P02656 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC3P02656 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms