Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
UPK1BO75841 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
UPK1BO75841 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UPK1BO75841 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.13■□□□□ 0.01
UPK1BO75841 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.13■□□□□ 0.01
UPK1BO75841 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.13■□□□□ 0.01
UPK1BO75841 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1BO75841 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
UPK1BO75841 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
UPK1BO75841 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1BO75841 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UPK1BO75841 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1BO75841 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UPK1BO75841 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
UPK1BO75841 AP002414.2-201ENST00000591780 3365 ntBASIC15.12■□□□□ 0.01
UPK1BO75841 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
UPK1BO75841 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1BO75841 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.12■□□□□ 0.01
UPK1BO75841 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.12■□□□□ 0.01
UPK1BO75841 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1BO75841 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1BO75841 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
UPK1BO75841 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK1BO75841 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
UPK1BO75841 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK1BO75841 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK1BO75841 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK1BO75841 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UPK1BO75841 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK1BO75841 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UPK1BO75841 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms