Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.31□□□□□ -0.28
COLCA2A8K830 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COLCA2A8K830 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.31□□□□□ -0.28
COLCA2A8K830 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COLCA2A8K830 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.31□□□□□ -0.28
COLCA2A8K830 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.31□□□□□ -0.28
COLCA2A8K830 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.31□□□□□ -0.28
COLCA2A8K830 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.31□□□□□ -0.28
COLCA2A8K830 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.31□□□□□ -0.28
COLCA2A8K830 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
COLCA2A8K830 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COLCA2A8K830 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COLCA2A8K830 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.31□□□□□ -0.28
COLCA2A8K830 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COLCA2A8K830 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COLCA2A8K830 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.31□□□□□ -0.28
COLCA2A8K830 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.31□□□□□ -0.28
COLCA2A8K830 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
COLCA2A8K830 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.31□□□□□ -0.28
COLCA2A8K830 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COLCA2A8K830 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
COLCA2A8K830 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COLCA2A8K830 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 AC009102.3-201ENST00000623118 1491 ntBASIC13.3□□□□□ -0.28
COLCA2A8K830 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.3□□□□□ -0.28
COLCA2A8K830 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.3□□□□□ -0.28
COLCA2A8K830 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 KRT16P3-201ENST00000439127 1283 ntBASIC13.3□□□□□ -0.28
COLCA2A8K830 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.3□□□□□ -0.28
COLCA2A8K830 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
COLCA2A8K830 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 AC009090.5-201ENST00000624886 2285 ntBASIC13.3□□□□□ -0.28
COLCA2A8K830 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 PKD1P5-201ENST00000532415 10291 ntBASIC13.3□□□□□ -0.28
COLCA2A8K830 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COLCA2A8K830 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COLCA2A8K830 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
COLCA2A8K830 AC093525.9-201ENST00000624961 1746 ntBASIC13.3□□□□□ -0.28
COLCA2A8K830 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
COLCA2A8K830 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COLCA2A8K830 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
COLCA2A8K830 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
COLCA2A8K830 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
COLCA2A8K830 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
COLCA2A8K830 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
COLCA2A8K830 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
COLCA2A8K830 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms