Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SBNO1A3KN83 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC23.3■■□□□ 1.32
SBNO1A3KN83 GOLGA6L11P-201ENST00000417252 1298 ntBASIC23.3■■□□□ 1.32
SBNO1A3KN83 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.3■■□□□ 1.32
SBNO1A3KN83 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC23.3■■□□□ 1.32
SBNO1A3KN83 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC23.3■■□□□ 1.32
SBNO1A3KN83 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC23.3■■□□□ 1.32
SBNO1A3KN83 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SBNO1A3KN83 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SBNO1A3KN83 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SBNO1A3KN83 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SBNO1A3KN83 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.3■■□□□ 1.32
SBNO1A3KN83 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SBNO1A3KN83 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
SBNO1A3KN83 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 AC007274.1-201ENST00000439805 662 ntBASIC23.29■■□□□ 1.32
SBNO1A3KN83 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 PPP6R2P1-201ENST00000450880 1275 ntBASIC23.29■■□□□ 1.32
SBNO1A3KN83 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 AC097493.3-201ENST00000509725 367 ntBASIC23.29■■□□□ 1.32
SBNO1A3KN83 IGHV3-42-201ENST00000520410 361 ntBASIC23.29■■□□□ 1.32
SBNO1A3KN83 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 AC069120.2-201ENST00000524091 540 ntBASIC23.29■■□□□ 1.32
SBNO1A3KN83 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 AC004408.2-201ENST00000623613 2777 ntBASIC23.29■■□□□ 1.32
SBNO1A3KN83 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SBNO1A3KN83 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SBNO1A3KN83 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 IGHV3-62-201ENST00000520057 340 ntBASIC23.28■■□□□ 1.32
SBNO1A3KN83 CR383656.12-201ENST00000549567 513 ntBASIC23.28■■□□□ 1.32
SBNO1A3KN83 AC005412.3-201ENST00000580309 715 ntBASIC23.28■■□□□ 1.32
SBNO1A3KN83 SPDYE22P-201ENST00000582158 798 ntBASIC23.28■■□□□ 1.32
SBNO1A3KN83 SSH2-211ENST00000590153 570 ntTSL 4 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SBNO1A3KN83 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC23.28■■□□□ 1.32
SBNO1A3KN83 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.27■■□□□ 1.32
SBNO1A3KN83 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SBNO1A3KN83 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
SBNO1A3KN83 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
SBNO1A3KN83 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 AC004890.2-204ENST00000481968 304 ntBASIC23.27■■□□□ 1.31
SBNO1A3KN83 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
SBNO1A3KN83 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC23.27■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms