Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 MINOS1P3-201ENST00000457048 203 ntBASIC17.62■□□□□ 0.41
CCDC78A2IDD5 AC096582.2-201ENST00000510860 516 ntBASIC17.62■□□□□ 0.41
CCDC78A2IDD5 AC074051.2-201ENST00000565115 352 ntBASIC17.62■□□□□ 0.41
CCDC78A2IDD5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 MIR3180-1-201ENST00000580374 94 ntBASIC17.61■□□□□ 0.41
CCDC78A2IDD5 MIR3180-3-201ENST00000584616 94 ntBASIC17.61■□□□□ 0.41
CCDC78A2IDD5 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 KRT8P10-201ENST00000450021 1447 ntBASIC17.61■□□□□ 0.41
CCDC78A2IDD5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 NSUN5P1-202ENST00000421140 1535 ntBASIC17.61■□□□□ 0.41
CCDC78A2IDD5 NSUN5P2-203ENST00000457352 1529 ntBASIC17.61■□□□□ 0.41
CCDC78A2IDD5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC78A2IDD5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 DRAXINP1-201ENST00000437611 948 ntBASIC17.6■□□□□ 0.41
CCDC78A2IDD5 KRT17P6-201ENST00000453795 1220 ntBASIC17.6■□□□□ 0.41
CCDC78A2IDD5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 Z69720.1-201ENST00000601483 472 ntBASIC17.6■□□□□ 0.41
CCDC78A2IDD5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC78A2IDD5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC78A2IDD5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC78A2IDD5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms