Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 AC002056.1-201ENST00000395613 760 ntBASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SPDYE7P-202ENST00000420373 878 ntBASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 CXCL1P1-201ENST00000502804 216 ntBASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 AC132938.2-201ENST00000579188 680 ntBASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 AL591163.1-201ENST00000641757 987 ntBASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNTNAP3Q9BZ76 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AL512384.1-201ENST00000406683 331 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AL020989.1-201ENST00000422979 469 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AC026150.2-201ENST00000564693 1156 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 GGTLC5P-201ENST00000617623 998 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AC084121.4-201ENST00000641598 221 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AF228730.8-201ENST00000642140 221 ntBASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNTNAP3Q9BZ76 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 Z98044.1-201ENST00000632503 1764 ntBASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 AC106886.1-201ENST00000568660 600 ntBASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CNTNAP3Q9BZ76 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms