Protein–RNA interactions for Protein: Q99828

CIB1, Calcium and integrin-binding protein 1, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIB1Q99828 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 AC093525.9-201ENST00000624961 1746 ntBASIC16.33■□□□□ 0.2
CIB1Q99828 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CIB1Q99828 AC024909.3-201ENST00000611513 2257 ntBASIC16.33■□□□□ 0.2
CIB1Q99828 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CIB1Q99828 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CIB1Q99828 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CIB1Q99828 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.32■□□□□ 0.2
CIB1Q99828 SLC25A1P3-201ENST00000395415 828 ntBASIC16.32■□□□□ 0.2
CIB1Q99828 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.32■□□□□ 0.2
CIB1Q99828 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.32■□□□□ 0.2
CIB1Q99828 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.32■□□□□ 0.2
CIB1Q99828 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.32■□□□□ 0.2
CIB1Q99828 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.32■□□□□ 0.2
CIB1Q99828 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.32■□□□□ 0.2
CIB1Q99828 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.32■□□□□ 0.2
CIB1Q99828 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CIB1Q99828 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CIB1Q99828 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.32■□□□□ 0.2
CIB1Q99828 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CIB1Q99828 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CIB1Q99828 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.31■□□□□ 0.2
CIB1Q99828 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 AC005104.2-201ENST00000427818 678 ntBASIC16.31■□□□□ 0.2
CIB1Q99828 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.31■□□□□ 0.2
CIB1Q99828 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 AC008687.5-201ENST00000593746 558 ntBASIC16.31■□□□□ 0.2
CIB1Q99828 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CIB1Q99828 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.31■□□□□ 0.2
CIB1Q99828 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
CIB1Q99828 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
CIB1Q99828 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CIB1Q99828 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CIB1Q99828 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.3■□□□□ 0.2
CIB1Q99828 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.3■□□□□ 0.2
CIB1Q99828 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CIB1Q99828 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
CIB1Q99828 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.3■□□□□ 0.2
CIB1Q99828 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.3■□□□□ 0.2
CIB1Q99828 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.3■□□□□ 0.2
CIB1Q99828 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.3■□□□□ 0.2
CIB1Q99828 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CIB1Q99828 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms