Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 KRT18P2-201ENST00000447938 1258 ntBASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 MTDHP5-201ENST00000598980 586 ntBASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 GNAS-203ENST00000306120 1878 ntBASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V0A1Q93050 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 LYSMD4-203ENST00000378904 2122 ntBASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V0A1Q93050 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 CRYGEP-201ENST00000412192 528 ntBASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 LINC00982-205ENST00000420957 435 ntBASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 ACTG1P4-201ENST00000425123 1122 ntBASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 AP001160.2-201ENST00000596071 487 ntBASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 AC079781.4-201ENST00000641908 219 ntBASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 AC007613.1-201ENST00000572811 2597 ntBASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 AC134043.2-201ENST00000624206 2238 ntBASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP6V0A1Q93050 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 AL135999.2-201ENST00000622438 1686 ntBASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 AC004967.1-201ENST00000453589 447 ntBASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 AC108073.2-201ENST00000464002 357 ntBASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP6V0A1Q93050 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms