Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC116407.4-201ENST00000623319 1061 ntBASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 AC080080.1-201ENST00000625121 2420 ntBASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP1Q8TDR0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAF3IP1Q8TDR0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAF3IP1Q8TDR0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAF3IP1Q8TDR0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.14■□□□□ 0.5
TRAF3IP1Q8TDR0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAF3IP1Q8TDR0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAF3IP1Q8TDR0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 AC103564.2-201ENST00000432853 1299 ntBASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 AC122714.2-201ENST00000502787 707 ntBASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 AC009533.2-201ENST00000543664 586 ntBASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP1Q8TDR0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 Z69720.1-201ENST00000601483 472 ntBASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 AC019129.2-201ENST00000609837 1235 ntBASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP1Q8TDR0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAF3IP1Q8TDR0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms