Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RAB3BP20337 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RAB3BP20337 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 HLA-L-209ENST00000420110 1011 ntBASIC15.27■□□□□ 0.04
RAB3BP20337 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.27■□□□□ 0.04
RAB3BP20337 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 AC024243.1-201ENST00000609234 778 ntBASIC15.27■□□□□ 0.04
RAB3BP20337 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB3BP20337 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 AC092068.3-201ENST00000587894 2016 ntBASIC15.27■□□□□ 0.03
RAB3BP20337 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.27■□□□□ 0.03
RAB3BP20337 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3BP20337 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 AC092171.3-201ENST00000610122 2651 ntBASIC15.27■□□□□ 0.03
RAB3BP20337 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3BP20337 AC103702.1-201ENST00000548801 2630 ntBASIC15.27■□□□□ 0.03
RAB3BP20337 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB3BP20337 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB3BP20337 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3BP20337 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB3BP20337 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
RAB3BP20337 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3BP20337 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
RAB3BP20337 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAB3BP20337 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 PVRIG2P-201ENST00000435460 978 ntBASIC15.26■□□□□ 0.03
RAB3BP20337 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.26■□□□□ 0.03
RAB3BP20337 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3BP20337 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB3BP20337 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
RAB3BP20337 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RAB3BP20337 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
RAB3BP20337 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB3BP20337 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3BP20337 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB3BP20337 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RAB3BP20337 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3BP20337 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.26■□□□□ 0.03
RAB3BP20337 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB3BP20337 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB3BP20337 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3BP20337 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3BP20337 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB3BP20337 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3BP20337 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3BP20337 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
RAB3BP20337 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3BP20337 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3BP20337 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3BP20337 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3BP20337 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3BP20337 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
RAB3BP20337 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3BP20337 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3BP20337 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3BP20337 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.25■□□□□ 0.03
RAB3BP20337 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB3BP20337 MIR3917-201ENST00000580971 93 ntBASIC15.25■□□□□ 0.03
RAB3BP20337 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
RAB3BP20337 AC092865.7-201ENST00000641832 219 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms