Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
APOC3P02656 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC3P02656 TPRG1LP1-201ENST00000598702 760 ntBASIC13.97□□□□□ -0.17
APOC3P02656 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.97□□□□□ -0.17
APOC3P02656 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
APOC3P02656 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 AC016396.2-201ENST00000562575 1417 ntBASIC13.97□□□□□ -0.17
APOC3P02656 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.97□□□□□ -0.17
APOC3P02656 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOC3P02656 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
APOC3P02656 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC3P02656 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOC3P02656 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
APOC3P02656 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
APOC3P02656 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.96□□□□□ -0.17
APOC3P02656 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC3P02656 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
APOC3P02656 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC3P02656 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 PVT1-219ENST00000523427 938 ntTSL 3 BASIC13.96□□□□□ -0.17
APOC3P02656 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.96□□□□□ -0.17
APOC3P02656 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC3P02656 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.96□□□□□ -0.17
APOC3P02656 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC3P02656 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.96□□□□□ -0.18
APOC3P02656 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.96□□□□□ -0.18
APOC3P02656 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC3P02656 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC3P02656 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
APOC3P02656 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOC3P02656 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.96□□□□□ -0.18
APOC3P02656 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
APOC3P02656 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
APOC3P02656 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
APOC3P02656 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC3P02656 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 NTF6A-201ENST00000591175 560 ntBASIC13.95□□□□□ -0.18
APOC3P02656 AC104187.1-201ENST00000607510 612 ntBASIC13.95□□□□□ -0.18
APOC3P02656 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
APOC3P02656 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
APOC3P02656 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
APOC3P02656 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC3P02656 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
APOC3P02656 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
APOC3P02656 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC3P02656 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.95□□□□□ -0.18
APOC3P02656 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms