Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.66□□□□□ -0.22
TOMM40O96008 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.66□□□□□ -0.22
TOMM40O96008 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 HBZP1-201ENST00000354915 429 ntBASIC13.66□□□□□ -0.22
TOMM40O96008 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TOMM40O96008 RNF152P1-201ENST00000397754 604 ntBASIC13.66□□□□□ -0.22
TOMM40O96008 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.66□□□□□ -0.22
TOMM40O96008 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.66□□□□□ -0.22
TOMM40O96008 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.66□□□□□ -0.22
TOMM40O96008 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
TOMM40O96008 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.66□□□□□ -0.22
TOMM40O96008 TCAF2P1-201ENST00000291129 2421 ntBASIC13.66□□□□□ -0.22
TOMM40O96008 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.66□□□□□ -0.22
TOMM40O96008 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.66□□□□□ -0.22
TOMM40O96008 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.65□□□□□ -0.22
TOMM40O96008 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 AC073508.3-201ENST00000619697 1419 ntBASIC13.65□□□□□ -0.22
TOMM40O96008 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.65□□□□□ -0.22
TOMM40O96008 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TOMM40O96008 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.65□□□□□ -0.22
TOMM40O96008 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TOMM40O96008 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.65□□□□□ -0.22
TOMM40O96008 TSPY5P-201ENST00000426936 936 ntBASIC13.65□□□□□ -0.22
TOMM40O96008 AC002558.1-201ENST00000488906 803 ntBASIC13.65□□□□□ -0.22
TOMM40O96008 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.65□□□□□ -0.22
TOMM40O96008 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 AL139327.4-201ENST00000612362 153 ntBASIC13.65□□□□□ -0.22
TOMM40O96008 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TOMM40O96008 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.65□□□□□ -0.22
TOMM40O96008 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TOMM40O96008 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TOMM40O96008 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TOMM40O96008 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TOMM40O96008 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TOMM40O96008 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TOMM40O96008 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TOMM40O96008 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.23
TOMM40O96008 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.64□□□□□ -0.23
TOMM40O96008 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.64□□□□□ -0.23
TOMM40O96008 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.64□□□□□ -0.23
TOMM40O96008 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.64□□□□□ -0.23
TOMM40O96008 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.64□□□□□ -0.23
TOMM40O96008 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.64□□□□□ -0.23
TOMM40O96008 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TOMM40O96008 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.64□□□□□ -0.23
TOMM40O96008 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.64□□□□□ -0.23
TOMM40O96008 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TOMM40O96008 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
TOMM40O96008 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms