Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 C2orf69P3-201ENST00000565542 1120 ntBASIC19.96■□□□□ 0.79
MBD3O95983 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
MBD3O95983 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.96■□□□□ 0.79
MBD3O95983 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.96■□□□□ 0.79
MBD3O95983 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 AC007950.2-201ENST00000615045 2347 ntBASIC19.96■□□□□ 0.79
MBD3O95983 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MBD3O95983 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.79
MBD3O95983 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3O95983 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
MBD3O95983 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3O95983 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD3O95983 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 AP003071.4-201ENST00000562276 1284 ntBASIC19.95■□□□□ 0.78
MBD3O95983 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.95■□□□□ 0.78
MBD3O95983 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD3O95983 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3O95983 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3O95983 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3O95983 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MBD3O95983 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.95■□□□□ 0.78
MBD3O95983 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
MBD3O95983 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MBD3O95983 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MBD3O95983 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
MBD3O95983 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
MBD3O95983 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD3O95983 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MBD3O95983 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.94■□□□□ 0.78
MBD3O95983 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
MBD3O95983 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.94■□□□□ 0.78
MBD3O95983 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD3O95983 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.94■□□□□ 0.78
MBD3O95983 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MBD3O95983 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.94■□□□□ 0.78
MBD3O95983 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
MBD3O95983 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
MBD3O95983 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.93■□□□□ 0.78
MBD3O95983 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 TSPY14P-201ENST00000303979 915 ntBASIC19.93■□□□□ 0.78
MBD3O95983 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 MIR935-201ENST00000401179 91 ntBASIC19.93■□□□□ 0.78
MBD3O95983 TSPY12P-201ENST00000421279 868 ntBASIC19.93■□□□□ 0.78
MBD3O95983 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.93■□□□□ 0.78
MBD3O95983 AL512604.3-201ENST00000569583 964 ntBASIC19.93■□□□□ 0.78
MBD3O95983 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.93■□□□□ 0.78
MBD3O95983 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MBD3O95983 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
MBD3O95983 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms