Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 AC019129.2-201ENST00000609837 1235 ntBASIC18.39■□□□□ 0.53
CAPN9O14815 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN9O14815 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN9O14815 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN9O14815 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN9O14815 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 UNC93B7-201ENST00000509439 705 ntBASIC18.38■□□□□ 0.53
CAPN9O14815 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN9O14815 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.38■□□□□ 0.53
CAPN9O14815 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.38■□□□□ 0.53
CAPN9O14815 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.38■□□□□ 0.53
CAPN9O14815 AD001527.2-201ENST00000622994 785 ntBASIC18.38■□□□□ 0.53
CAPN9O14815 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN9O14815 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN9O14815 PCDHA12-202ENST00000613593 2588 ntBASIC18.37■□□□□ 0.53
CAPN9O14815 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN9O14815 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 LINC00896-202ENST00000609602 2128 ntBASIC18.37■□□□□ 0.53
CAPN9O14815 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.37■□□□□ 0.53
CAPN9O14815 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.37■□□□□ 0.53
CAPN9O14815 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CAPN9O14815 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN9O14815 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CAPN9O14815 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CAPN9O14815 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
CAPN9O14815 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CAPN9O14815 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN9O14815 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN9O14815 AC124067.4-201ENST00000519691 2379 ntBASIC18.37■□□□□ 0.53
CAPN9O14815 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN9O14815 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms