Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 AC060834.1-201ENST00000443027 2032 ntBASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 FAM8A6P-201ENST00000407496 1135 ntBASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 AC034232.1-201ENST00000506026 1064 ntBASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 AC022616.7-201ENST00000525383 220 ntBASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 GCSHP2-201ENST00000560971 527 ntBASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP4B1Q9Y6B7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 LINC01126-201ENST00000623515 1646 ntBASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
AP4B1Q9Y6B7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 LINC00304-203ENST00000565008 1864 ntBASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 AC024243.1-201ENST00000609234 778 ntBASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.76■□□□□ 0.27
AP4B1Q9Y6B7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms