Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.64■□□□□ 0.58
PCDHB7Q9Y5E2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 AC004449.1-201ENST00000564240 433 ntBASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 LINC01451-201ENST00000623792 534 ntBASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 AL513210.1-201ENST00000629608 234 ntBASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 AC105339.1-204ENST00000636249 355 ntBASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 AC129492.6-201ENST00000611383 1305 ntBASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB7Q9Y5E2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 AC112191.1-201ENST00000523689 701 ntBASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 ACTL9-202ENST00000612068 1252 ntBASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 AC093028.1-201ENST00000622998 982 ntBASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB7Q9Y5E2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 AC004461.1-201ENST00000412461 403 ntBASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 AC006116.8-202ENST00000587620 1550 ntBASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB7Q9Y5E2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms