Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
LITAFQ99732 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
LITAFQ99732 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LITAFQ99732 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LITAFQ99732 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 AC026185.1-201ENST00000445748 174 ntBASIC11.59□□□□□ -0.55
LITAFQ99732 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC11.59□□□□□ -0.55
LITAFQ99732 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.59□□□□□ -0.55
LITAFQ99732 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 AC008403.3-201ENST00000598924 454 ntBASIC11.59□□□□□ -0.55
LITAFQ99732 AC069544.1-201ENST00000609399 999 ntBASIC11.59□□□□□ -0.55
LITAFQ99732 AL023875.1-201ENST00000640777 796 ntBASIC11.59□□□□□ -0.55
LITAFQ99732 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LITAFQ99732 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.59□□□□□ -0.55
LITAFQ99732 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LITAFQ99732 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.59□□□□□ -0.55
LITAFQ99732 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LITAFQ99732 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
LITAFQ99732 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
LITAFQ99732 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
LITAFQ99732 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LITAFQ99732 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
LITAFQ99732 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LITAFQ99732 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC11.58□□□□□ -0.56
LITAFQ99732 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC11.58□□□□□ -0.56
LITAFQ99732 AC239809.2-201ENST00000415381 517 ntBASIC11.58□□□□□ -0.56
LITAFQ99732 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC11.58□□□□□ -0.56
LITAFQ99732 CA15P1-201ENST00000481698 905 ntBASIC11.58□□□□□ -0.56
LITAFQ99732 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC11.58□□□□□ -0.56
LITAFQ99732 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.58□□□□□ -0.56
LITAFQ99732 AC098934.4-201ENST00000564127 592 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms