Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 ACTG1P14-201ENST00000446382 1122 ntBASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 AC011467.4-201ENST00000594891 528 ntBASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 AL805961.1-202ENST00000641562 540 ntBASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC46A1Q96NT5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 AC027612.4-201ENST00000605371 583 ntBASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC46A1Q96NT5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 AP000344.2-201ENST00000512987 629 ntBASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 KRT19P2-202ENST00000557173 1012 ntBASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 GGTLC5P-201ENST00000617623 998 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms