Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 AC023274.1-201ENST00000418278 595 ntBASIC14.17□□□□□ -0.14
ZNF48Q96MX3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 AC108751.1-201ENST00000490852 363 ntBASIC14.17□□□□□ -0.14
ZNF48Q96MX3 AC112482.1-201ENST00000492080 688 ntBASIC14.17□□□□□ -0.14
ZNF48Q96MX3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 AC136632.2-201ENST00000512891 861 ntBASIC14.17□□□□□ -0.14
ZNF48Q96MX3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF48Q96MX3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ELK2BP-201ENST00000415014 1224 ntBASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AL020989.1-201ENST00000422979 469 ntBASIC14.16□□□□□ -0.14
ZNF48Q96MX3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AC064836.3-201ENST00000607928 673 ntBASIC14.16□□□□□ -0.14
ZNF48Q96MX3 PGM5P2-202ENST00000637225 1043 ntBASIC14.16□□□□□ -0.14
ZNF48Q96MX3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AC018470.1-201ENST00000624790 3129 ntBASIC14.16□□□□□ -0.14
ZNF48Q96MX3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF48Q96MX3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.15□□□□□ -0.14
ZNF48Q96MX3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms