Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC046185.3-201ENST00000623228 1824 ntBASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC149Q6ZUS6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 SPCS2P1-201ENST00000561636 679 ntBASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 AC004835.2-201ENST00000603762 682 ntBASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 AC025580.3-201ENST00000617932 1424 ntBASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC149Q6ZUS6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 CXCL1P1-201ENST00000502804 216 ntBASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AC004449.1-201ENST00000564240 433 ntBASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AC091812.2-201ENST00000619081 385 ntBASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 AC138028.4-201ENST00000564984 1845 ntBASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC149Q6ZUS6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC149Q6ZUS6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.21■□□□□ 0.5
CCDC149Q6ZUS6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC149Q6ZUS6 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms