Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 FAM8A6P-201ENST00000407496 1135 ntBASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 AC104076.2-201ENST00000448912 469 ntBASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM53Q6P2H8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM53Q6P2H8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 PVRIG2P-201ENST00000435460 978 ntBASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 FAM210CP-201ENST00000445714 574 ntBASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 PCDHA14-201ENST00000506751 2298 ntBASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 SDHAP2-201ENST00000455183 2001 ntBASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM53Q6P2H8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms