Protein–RNA interactions for Protein: Q5VT33

LINC01545, Putative uncharacterized protein encoded by LINC01545, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01545Q5VT33 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01545Q5VT33 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 HLA-A-202ENST00000376806 1854 ntBASIC12.36□□□□□ -0.43
LINC01545Q5VT33 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SLC25A1P3-201ENST00000395415 828 ntBASIC12.36□□□□□ -0.43
LINC01545Q5VT33 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 AC124947.2-201ENST00000547118 1133 ntBASIC12.36□□□□□ -0.43
LINC01545Q5VT33 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 AL031432.3-201ENST00000607698 485 ntBASIC12.36□□□□□ -0.43
LINC01545Q5VT33 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 AC093525.9-201ENST00000624961 1746 ntBASIC12.36□□□□□ -0.43
LINC01545Q5VT33 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01545Q5VT33 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 AL512625.2-201ENST00000417533 625 ntBASIC12.35□□□□□ -0.43
LINC01545Q5VT33 KRT18P11-201ENST00000435214 1283 ntBASIC12.35□□□□□ -0.43
LINC01545Q5VT33 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.35□□□□□ -0.43
LINC01545Q5VT33 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01545Q5VT33 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms