Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 MIR4785-201ENST00000585005 73 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 Z99916.2-201ENST00000604037 246 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 AL162727.3-201ENST00000635661 2787 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC078925.2-201ENST00000624013 1973 ntBASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 TSPY12P-201ENST00000421279 868 ntBASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC002558.1-201ENST00000488906 803 ntBASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC008741.2-201ENST00000612792 3115 ntBASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC079328.2-201ENST00000561241 3354 ntBASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00242Q5T6M2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00242Q5T6M2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms