Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CAPN3P20807 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
CAPN3P20807 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CAPN3P20807 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CAPN3P20807 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN3P20807 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN3P20807 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CAPN3P20807 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 AP000523.1-201ENST00000398242 1049 ntBASIC16.78■□□□□ 0.28
CAPN3P20807 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
CAPN3P20807 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPN3P20807 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN3P20807 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 LINC02012-201ENST00000608206 1725 ntBASIC16.78■□□□□ 0.28
CAPN3P20807 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN3P20807 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN3P20807 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CAPN3P20807 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAPN3P20807 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN3P20807 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN3P20807 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN3P20807 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN3P20807 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 AC092053.1-201ENST00000605787 1936 ntBASIC16.77■□□□□ 0.28
CAPN3P20807 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN3P20807 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN3P20807 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN3P20807 VENTXP5-201ENST00000523979 775 ntBASIC16.77■□□□□ 0.28
CAPN3P20807 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.77■□□□□ 0.28
CAPN3P20807 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN3P20807 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN3P20807 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN3P20807 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAPN3P20807 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CAPN3P20807 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN3P20807 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.77■□□□□ 0.27
CAPN3P20807 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CAPN3P20807 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN3P20807 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
CAPN3P20807 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CAPN3P20807 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.77■□□□□ 0.27
CAPN3P20807 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN3P20807 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN3P20807 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.77■□□□□ 0.27
CAPN3P20807 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CAPN3P20807 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.77■□□□□ 0.27
CAPN3P20807 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN3P20807 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN3P20807 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAPN3P20807 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
CAPN3P20807 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CAPN3P20807 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN3P20807 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAPN3P20807 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN3P20807 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 AL391807.1-203ENST00000604392 2365 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms