Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 FAM87A-204ENST00000613235 858 ntBASIC16.48■□□□□ 0.23
MT-ND1P03886 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
MT-ND1P03886 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
MT-ND1P03886 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-ND1P03886 DDX43P3-201ENST00000441064 443 ntBASIC16.47■□□□□ 0.23
MT-ND1P03886 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-ND1P03886 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-ND1P03886 ECEL1P2-202ENST00000465689 757 ntBASIC16.47■□□□□ 0.23
MT-ND1P03886 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.47■□□□□ 0.23
MT-ND1P03886 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-ND1P03886 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.47■□□□□ 0.23
MT-ND1P03886 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.47■□□□□ 0.23
MT-ND1P03886 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND1P03886 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-ND1P03886 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.47■□□□□ 0.23
MT-ND1P03886 AC092053.1-201ENST00000605787 1936 ntBASIC16.47■□□□□ 0.23
MT-ND1P03886 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MT-ND1P03886 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.46■□□□□ 0.23
MT-ND1P03886 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 LINC00554-201ENST00000564841 3011 ntBASIC16.46■□□□□ 0.23
MT-ND1P03886 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND1P03886 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MT-ND1P03886 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.46■□□□□ 0.23
MT-ND1P03886 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND1P03886 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MT-ND1P03886 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND1P03886 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND1P03886 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.46■□□□□ 0.23
MT-ND1P03886 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.46■□□□□ 0.23
MT-ND1P03886 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.46■□□□□ 0.23
MT-ND1P03886 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.46■□□□□ 0.23
MT-ND1P03886 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MT-ND1P03886 AC092865.7-201ENST00000641832 219 ntBASIC16.46■□□□□ 0.23
MT-ND1P03886 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
MT-ND1P03886 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MT-ND1P03886 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
MT-ND1P03886 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
MT-ND1P03886 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MT-ND1P03886 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
MT-ND1P03886 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MT-ND1P03886 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms