Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.25■□□□□ 0.83
CTNND1O60716 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.25■□□□□ 0.83
CTNND1O60716 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.25■□□□□ 0.83
CTNND1O60716 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CTNND1O60716 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.25■□□□□ 0.83
CTNND1O60716 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.25■□□□□ 0.83
CTNND1O60716 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CTNND1O60716 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CTNND1O60716 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.24■□□□□ 0.83
CTNND1O60716 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
CTNND1O60716 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.24■□□□□ 0.83
CTNND1O60716 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.24■□□□□ 0.83
CTNND1O60716 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 AC106028.4-201ENST00000614509 607 ntBASIC20.24■□□□□ 0.83
CTNND1O60716 AC093028.1-201ENST00000622998 982 ntBASIC20.24■□□□□ 0.83
CTNND1O60716 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.24■□□□□ 0.83
CTNND1O60716 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 AC129492.6-201ENST00000611383 1305 ntBASIC20.24■□□□□ 0.83
CTNND1O60716 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.24■□□□□ 0.83
CTNND1O60716 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTNND1O60716 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTNND1O60716 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTNND1O60716 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTNND1O60716 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CTNND1O60716 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CTNND1O60716 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.23■□□□□ 0.83
CTNND1O60716 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.23■□□□□ 0.83
CTNND1O60716 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.23■□□□□ 0.83
CTNND1O60716 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.23■□□□□ 0.83
CTNND1O60716 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTNND1O60716 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTNND1O60716 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CTNND1O60716 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CTNND1O60716 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.23■□□□□ 0.83
CTNND1O60716 AC006116.8-202ENST00000587620 1550 ntBASIC20.23■□□□□ 0.83
CTNND1O60716 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.23■□□□□ 0.83
CTNND1O60716 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.23■□□□□ 0.83
CTNND1O60716 AL139327.4-201ENST00000612362 153 ntBASIC20.23■□□□□ 0.83
CTNND1O60716 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTNND1O60716 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
CTNND1O60716 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.23■□□□□ 0.83
CTNND1O60716 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CTNND1O60716 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CTNND1O60716 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTNND1O60716 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.22■□□□□ 0.83
CTNND1O60716 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTNND1O60716 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 MIR770-201ENST00000390219 98 ntBASIC20.22■□□□□ 0.83
CTNND1O60716 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.22■□□□□ 0.83
CTNND1O60716 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.22■□□□□ 0.83
CTNND1O60716 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.22■□□□□ 0.83
CTNND1O60716 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 SLC25A6P2-201ENST00000497974 877 ntBASIC20.22■□□□□ 0.83
CTNND1O60716 AC112191.1-201ENST00000523689 701 ntBASIC20.22■□□□□ 0.83
CTNND1O60716 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTNND1O60716 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.22■□□□□ 0.83
CTNND1O60716 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CTNND1O60716 AC092919.2-201ENST00000623631 1645 ntBASIC20.22■□□□□ 0.83
CTNND1O60716 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms