Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 AC122714.2-201ENST00000502787 707 ntBASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 AC005336.2-201ENST00000593183 939 ntBASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 AC016396.2-201ENST00000562575 1417 ntBASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA11Q9Y5H2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 AC103564.2-201ENST00000432853 1299 ntBASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 AL139327.4-201ENST00000612362 153 ntBASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA11Q9Y5H2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 AL513477.1-201ENST00000602865 2407 ntBASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 IER3-202ENST00000376377 1350 ntBASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 FAM220CP-201ENST00000395253 831 ntBASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 TSSC2-201ENST00000450217 709 ntBASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 IGHV3-52-201ENST00000519770 353 ntBASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 AC009533.2-201ENST00000543664 586 ntBASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 KRT18P1-202ENST00000452408 1331 ntBASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA11Q9Y5H2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms