Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 AL136379.1-201ENST00000623471 2642 ntBASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 AP000593.1-201ENST00000393668 712 ntBASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 MIR1224-201ENST00000408193 85 ntBASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
R3HCC1Q9Y3T6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 GCSHP2-201ENST00000560971 527 ntBASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.02■□□□□ 0.8
R3HCC1Q9Y3T6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
R3HCC1Q9Y3T6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
R3HCC1Q9Y3T6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.02■□□□□ 0.79
R3HCC1Q9Y3T6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.02■□□□□ 0.79
R3HCC1Q9Y3T6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
R3HCC1Q9Y3T6 AC112777.1-201ENST00000540175 1423 ntBASIC20.02■□□□□ 0.79
R3HCC1Q9Y3T6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 AL441883.1-201ENST00000566170 1045 ntBASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
R3HCC1Q9Y3T6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms