Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 FGFR1-222ENST00000487647 1608 ntTSL 1 (best)22.24■■□□□ 1.154e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.42■■□□□ 1.024e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.874e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC19.65■□□□□ 0.744e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC19.65■□□□□ 0.744e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC18.57■□□□□ 0.564e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC17.2■□□□□ 0.344e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.244e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)14.66□□□□□ -0.064e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC14.61□□□□□ -0.074e-8■□□□□ 10.2
DROSHAQ9NRR4 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.114e-8■□□□□ 10.2
DROSHAQ9NRR4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.796e-7■□□□□ 10.2
DROSHAQ9NRR4 GDI1-214ENST00000491154 4069 ntTSL 212.81□□□□□ -0.366e-7■□□□□ 10.2
DROSHAQ9NRR4 ATP5B-203ENST00000547808 705 ntTSL 529.8■■■□□ 2.361e-21■□□□□ 10.2
DROSHAQ9NRR4 ATP5B-210ENST00000552959 1085 ntTSL 329.8■■■□□ 2.361e-21■□□□□ 10.2
DROSHAQ9NRR4 ATP5B-207ENST00000551020 856 ntTSL 329.15■■■□□ 2.261e-21■□□□□ 10.2
DROSHAQ9NRR4 ATP5B-211ENST00000553007 814 ntTSL 529.15■■■□□ 2.261e-21■□□□□ 10.2
DROSHAQ9NRR4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.531e-21■□□□□ 10.2
DROSHAQ9NRR4 ATP5B-205ENST00000548647 682 ntTSL 524.55■■□□□ 1.521e-21■□□□□ 10.2
DROSHAQ9NRR4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.787e-28■□□□□ 10.2
DROSHAQ9NRR4 XPO1-206ENST00000428210 6776 ntTSL 216.55■□□□□ 0.247e-28■□□□□ 10.2
DROSHAQ9NRR4 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.47e-28■□□□□ 10.2
DROSHAQ9NRR4 XPO1-209ENST00000443240 565 ntTSL 44.31□□□□□ -1.727e-28■□□□□ 10.2
DROSHAQ9NRR4 XPO1-207ENST00000436018 318 ntTSL 43.69□□□□□ -1.827e-28■□□□□ 10.2
DROSHAQ9NRR4 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.542e-11■□□□□ 10.1
DROSHAQ9NRR4 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.572e-11■□□□□ 10.1
DROSHAQ9NRR4 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.982e-11■□□□□ 10.1
DROSHAQ9NRR4 SMG1P3-205ENST00000522480 4262 ntBASIC16.61■□□□□ 0.256e-8■□□□□ 10.1
DROSHAQ9NRR4 PGGHG-208ENST00000529087 745 ntTSL 227.58■■■□□ 2.011e-6■□□□□ 10.1
DROSHAQ9NRR4 LUC7L2-203ENST00000435096 570 ntTSL 328.19■■■□□ 2.12e-19■□□□□ 10.1
DROSHAQ9NRR4 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)27.2■■□□□ 1.942e-19■□□□□ 10.1
DROSHAQ9NRR4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC26.45■■□□□ 1.822e-19■□□□□ 10.1
DROSHAQ9NRR4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.682e-19■□□□□ 10.1
DROSHAQ9NRR4 LUC7L2-209ENST00000608368 551 ntTSL 422.63■■□□□ 1.212e-19■□□□□ 10.1
DROSHAQ9NRR4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC20.94■□□□□ 0.942e-19■□□□□ 10.1
DROSHAQ9NRR4 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.132e-19■□□□□ 10.1
DROSHAQ9NRR4 TNS3-205ENST00000434451 560 ntTSL 525.6■■□□□ 1.696e-8■□□□□ 10.1
DROSHAQ9NRR4 TNS3-211ENST00000474346 775 ntTSL 320.86■□□□□ 0.936e-8■□□□□ 10.1
DROSHAQ9NRR4 TNS3-208ENST00000457718 3836 ntTSL 514.14□□□□□ -0.156e-8■□□□□ 10.1
DROSHAQ9NRR4 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.686e-8■□□□□ 10.1
DROSHAQ9NRR4 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)15.41■□□□□ 0.061e-23■□□□□ 10.1
DROSHAQ9NRR4 AP005263.1-202ENST00000578850 198 ntTSL 229.3■■■□□ 2.288e-8■□□□□ 10.1
DROSHAQ9NRR4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC29.3■■■□□ 2.288e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-207ENST00000468968 904 ntTSL 530.23■■■□□ 2.434e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC30.23■■■□□ 2.434e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-212ENST00000495483 2471 ntTSL 228.49■■■□□ 2.154e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC27.82■■■□□ 2.044e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-208ENST00000470607 965 ntTSL 327.22■■□□□ 1.954e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-210ENST00000490768 1056 ntTSL 325.23■■□□□ 1.634e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.594e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-213ENST00000497522 816 ntTSL 424.37■■□□□ 1.494e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-209ENST00000479246 963 ntTSL 323.3■■□□□ 1.324e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.34e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-217ENST00000539753 816 ntTSL 522.74■■□□□ 1.234e-8■□□□□ 10.1
DROSHAQ9NRR4 PPOX-204ENST00000462866 473 ntTSL 5 BASIC21.85■■□□□ 1.094e-8■□□□□ 10.1
DROSHAQ9NRR4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC43.21■■■■■ 4.514e-9■□□□□ 10.1
DROSHAQ9NRR4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC41.93■■■■■ 4.34e-9■□□□□ 10.1
DROSHAQ9NRR4 MSH6-202ENST00000411819 548 ntTSL 434.66■■■■□ 3.141e-14■□□□□ 10.1
DROSHAQ9NRR4 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.244e-9■□□□□ 10.1
DROSHAQ9NRR4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC42.22■■■■■ 4.351e-7■□□□□ 10.1
DROSHAQ9NRR4 SAMD1-201ENST00000269724 750 ntAPPRIS ALT2 TSL 529.45■■■□□ 2.311e-7■□□□□ 10.1
DROSHAQ9NRR4 PFKL-204ENST00000460521 2818 ntTSL 220.83■□□□□ 0.934e-7■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-208ENST00000455407 837 ntTSL 244.16■■■■■ 4.662e-9■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-212ENST00000483980 1015 ntTSL 243.92■■■■■ 4.622e-9■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC42.06■■■■■ 4.322e-9■□□□□ 10.1
DROSHAQ9NRR4 TAOK3-216ENST00000542532 641 ntTSL 240.19■■■■■ 4.022e-9■□□□□ 10.1
DROSHAQ9NRR4 TAOK3-217ENST00000542692 588 ntTSL 338.44■■■■□ 3.742e-9■□□□□ 10.1
DROSHAQ9NRR4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC36.53■■■■□ 3.443e-6■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-204ENST00000416230 720 ntTSL 233.21■■■□□ 2.912e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC31.79■■■□□ 2.682e-9■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.582e-9■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.42e-9■□□□□ 10.1
DROSHAQ9NRR4 SSX2IP-207ENST00000481102 2457 ntTSL 529.02■■■□□ 2.243e-6■□□□□ 10.1
DROSHAQ9NRR4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC28.25■■■□□ 2.113e-6■□□□□ 10.1
DROSHAQ9NRR4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.012e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-207ENST00000465947 793 ntTSL 527.43■■□□□ 1.982e-9■□□□□ 10.1
DROSHAQ9NRR4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.16■■□□□ 1.783e-6■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-208ENST00000466101 911 ntTSL 225.81■■□□□ 1.722e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-226ENST00000631619 2457 ntTSL 525.75■■□□□ 1.712e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC25.01■■□□□ 1.592e-9■□□□□ 10.1
DROSHAQ9NRR4 TAL1-206ENST00000481091 504 ntTSL 324.38■■□□□ 1.498e-11■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC24.21■■□□□ 1.472e-9■□□□□ 10.1
DROSHAQ9NRR4 FASN-212ENST00000637525 141 ntTSL 523.96■■□□□ 1.432e-9■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-202ENST00000418385 574 ntTSL 423.47■■□□□ 1.352e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-222ENST00000479596 883 ntTSL 323.21■■□□□ 1.312e-9■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC22.21■■□□□ 1.152e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-217ENST00000476367 1603 ntTSL 1 (best)22.07■■□□□ 1.122e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.12e-9■□□□□ 10.1
DROSHAQ9NRR4 SSX2IP-202ENST00000422026 759 ntTSL 321.89■■□□□ 1.13e-6■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-219ENST00000477127 1464 ntTSL 521■□□□□ 0.952e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-212ENST00000470121 1889 ntTSL 1 (best)20.76■□□□□ 0.912e-9■□□□□ 10.1
DROSHAQ9NRR4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.832e-9■□□□□ 10.1
DROSHAQ9NRR4 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC19.43■□□□□ 0.72e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-213ENST00000471044 753 ntTSL 219.19■□□□□ 0.662e-9■□□□□ 10.1
DROSHAQ9NRR4 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)18.49■□□□□ 0.552e-9■□□□□ 10.1
DROSHAQ9NRR4 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.42e-9■□□□□ 10.1
DROSHAQ9NRR4 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-6■□□□□ 10.1
DROSHAQ9NRR4 SSX2IP-206ENST00000476905 2272 ntTSL 213.82□□□□□ -0.23e-6■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-209ENST00000507665 1143 ntTSL 210.47□□□□□ -0.732e-9■□□□□ 10.1
DROSHAQ9NRR4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.09□□□□□ -1.122e-9■□□□□ 10.1
Retrieved 100 of 16,331 protein–RNA pairs in 403 ms