RNA–Protein interactions for RNA: ENST00000337386.9

NAB1-201, Transcript of NGFI-A binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NAB1, Length 4,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAB1-201ENST00000337386 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
NAB1-201ENST00000337386 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
NAB1-201ENST00000337386 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.99
NAB1-201ENST00000337386 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
NAB1-201ENST00000337386 PCGF6Q9BYE7 350 aa20.1■□□□□ 0.81
NAB1-201ENST00000337386 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.8
NAB1-201ENST00000337386 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
NAB1-201ENST00000337386 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
NAB1-201ENST00000337386 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.77
NAB1-201ENST00000337386 FAM9AQ8IZU1 332 aaPredicted RBP19.77■□□□□ 0.76
NAB1-201ENST00000337386 HRCP23327 699 aa19.75■□□□□ 0.75
NAB1-201ENST00000337386 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
NAB1-201ENST00000337386 PPARGC1BQ86YN6 1023 aaKnown RBP19.66■□□□□ 0.74
NAB1-201ENST00000337386 CCDC180Q9P1Z9 1646 aa19.64■□□□□ 0.73
NAB1-201ENST00000337386 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
NAB1-201ENST00000337386 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.68
NAB1-201ENST00000337386 TTBK1Q5TCY1 1321 aaPredicted RBP19.29■□□□□ 0.68
NAB1-201ENST00000337386 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
NAB1-201ENST00000337386 ABCC9O60706 1549 aa19.13■□□□□ 0.65
NAB1-201ENST00000337386 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
NAB1-201ENST00000337386 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
NAB1-201ENST00000337386 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
NAB1-201ENST00000337386 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
NAB1-201ENST00000337386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
NAB1-201ENST00000337386 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
NAB1-201ENST00000337386 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
NAB1-201ENST00000337386 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
NAB1-201ENST00000337386 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
NAB1-201ENST00000337386 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
NAB1-201ENST00000337386 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
NAB1-201ENST00000337386 APLP2Q06481 763 aa18.54■□□□□ 0.56
NAB1-201ENST00000337386 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
NAB1-201ENST00000337386 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
NAB1-201ENST00000337386 NACADO15069 1562 aa18.43■□□□□ 0.54
NAB1-201ENST00000337386 WIZO95785 1651 aa18.42■□□□□ 0.54
NAB1-201ENST00000337386 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
NAB1-201ENST00000337386 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
NAB1-201ENST00000337386 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
NAB1-201ENST00000337386 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
NAB1-201ENST00000337386 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
NAB1-201ENST00000337386 SOGA1O94964 1423 aa18.24■□□□□ 0.51
NAB1-201ENST00000337386 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
NAB1-201ENST00000337386 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
NAB1-201ENST00000337386 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
NAB1-201ENST00000337386 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
NAB1-201ENST00000337386 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
NAB1-201ENST00000337386 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
NAB1-201ENST00000337386 ITGAEP38570 1179 aa18.17■□□□□ 0.5
NAB1-201ENST00000337386 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
NAB1-201ENST00000337386 ZNF316A6NFI3 1004 aaPredicted RBP18.1■□□□□ 0.49
NAB1-201ENST00000337386 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
NAB1-201ENST00000337386 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
NAB1-201ENST00000337386 TNIKQ9UKE5 1360 aa18.05■□□□□ 0.48
NAB1-201ENST00000337386 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
NAB1-201ENST00000337386 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
NAB1-201ENST00000337386 GOLGA3Q08378 1498 aa17.98■□□□□ 0.47
NAB1-201ENST00000337386 CLIP1P30622 1438 aa17.97■□□□□ 0.47
NAB1-201ENST00000337386 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
NAB1-201ENST00000337386 EEA1Q15075 1411 aa17.92■□□□□ 0.46
NAB1-201ENST00000337386 MIER1Q8N108 512 aa17.92■□□□□ 0.46
NAB1-201ENST00000337386 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
NAB1-201ENST00000337386 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
NAB1-201ENST00000337386 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
NAB1-201ENST00000337386 P3H3Q8IVL6 736 aa17.78■□□□□ 0.44
NAB1-201ENST00000337386 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
NAB1-201ENST00000337386 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
NAB1-201ENST00000337386 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
NAB1-201ENST00000337386 KANK4Q5T7N3 995 aaPredicted RBP17.68■□□□□ 0.42
NAB1-201ENST00000337386 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
NAB1-201ENST00000337386 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
NAB1-201ENST00000337386 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
NAB1-201ENST00000337386 BCANQ96GW7 911 aa17.57■□□□□ 0.4
NAB1-201ENST00000337386 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
NAB1-201ENST00000337386 HIRIP3Q9BW71 556 aaPredicted RBP17.53■□□□□ 0.4
NAB1-201ENST00000337386 KIF27Q86VH2 1401 aa17.51■□□□□ 0.39
NAB1-201ENST00000337386 BICRAQ9NZM4 1560 aa17.48■□□□□ 0.39
NAB1-201ENST00000337386 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
NAB1-201ENST00000337386 KIF21BO75037 1637 aa17.45■□□□□ 0.38
NAB1-201ENST00000337386 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
NAB1-201ENST00000337386 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
NAB1-201ENST00000337386 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
NAB1-201ENST00000337386 CCNB3Q8WWL7 1395 aa17.42■□□□□ 0.38
NAB1-201ENST00000337386 NEFLP07196 543 aa17.42■□□□□ 0.38
NAB1-201ENST00000337386 CUX2O14529 1486 aa17.39■□□□□ 0.37
NAB1-201ENST00000337386 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
NAB1-201ENST00000337386 KCNH8Q96L42 1107 aa17.33■□□□□ 0.36
NAB1-201ENST00000337386 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
NAB1-201ENST00000337386 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
NAB1-201ENST00000337386 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
NAB1-201ENST00000337386 CARMIL1Q5VZK9 1371 aa17.31■□□□□ 0.36
NAB1-201ENST00000337386 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
NAB1-201ENST00000337386 ANP32CO43423 234 aa17.29■□□□□ 0.36
NAB1-201ENST00000337386 FKBP8Q14318 412 aa17.28■□□□□ 0.36
NAB1-201ENST00000337386 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
NAB1-201ENST00000337386 CHIC2Q9UKJ5 165 aa17.26■□□□□ 0.35
NAB1-201ENST00000337386 MYT1Q01538 1121 aa17.26■□□□□ 0.35
NAB1-201ENST00000337386 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
NAB1-201ENST00000337386 POLR3GLQ9BT43 218 aa17.25■□□□□ 0.35
NAB1-201ENST00000337386 PRXQ9BXM0 1461 aa17.24■□□□□ 0.35
NAB1-201ENST00000337386 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms