Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NR1H4Q96RI1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 AC006058.4-201ENST00000624016 1670 ntBASIC16.43■□□□□ 0.22
NR1H4Q96RI1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 MIR149-201ENST00000384879 89 ntBASIC16.43■□□□□ 0.22
NR1H4Q96RI1 PRSS44-201ENST00000515154 1146 ntBASIC16.43■□□□□ 0.22
NR1H4Q96RI1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 AC098934.4-201ENST00000564127 592 ntBASIC16.43■□□□□ 0.22
NR1H4Q96RI1 AL138781.1-201ENST00000566567 1274 ntBASIC16.43■□□□□ 0.22
NR1H4Q96RI1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 HLA-B-256ENST00000639848 1089 ntBASIC16.43■□□□□ 0.22
NR1H4Q96RI1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NR1H4Q96RI1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 MIR564-202ENST00000385049 94 ntBASIC16.42■□□□□ 0.22
NR1H4Q96RI1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.42■□□□□ 0.22
NR1H4Q96RI1 PNMA6B-201ENST00000538162 1200 ntBASIC16.42■□□□□ 0.22
NR1H4Q96RI1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NR1H4Q96RI1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.41■□□□□ 0.22
NR1H4Q96RI1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms