Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 MESTP1-201ENST00000404287 994 ntBASIC17.59■□□□□ 0.41
PACS2Q86VP3 MIR1238-201ENST00000408483 83 ntBASIC17.59■□□□□ 0.41
PACS2Q86VP3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 AC097488.1-201ENST00000507834 756 ntBASIC17.59■□□□□ 0.41
PACS2Q86VP3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 RN7SL275P-201ENST00000582762 335 ntBASIC17.59■□□□□ 0.41
PACS2Q86VP3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 MYC-208ENST00000641036 567 ntBASIC17.59■□□□□ 0.41
PACS2Q86VP3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 AL365203.3-201ENST00000609742 2057 ntBASIC17.59■□□□□ 0.41
PACS2Q86VP3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACS2Q86VP3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.58■□□□□ 0.41
PACS2Q86VP3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACS2Q86VP3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACS2Q86VP3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PACS2Q86VP3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.58■□□□□ 0.41
PACS2Q86VP3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PACS2Q86VP3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PACS2Q86VP3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 AP000692.2-201ENST00000608391 879 ntBASIC17.58■□□□□ 0.4
PACS2Q86VP3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PACS2Q86VP3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PACS2Q86VP3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 AC091390.4-202ENST00000476426 537 ntBASIC17.57■□□□□ 0.4
PACS2Q86VP3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.57■□□□□ 0.4
PACS2Q86VP3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.57■□□□□ 0.4
PACS2Q86VP3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 FAM45BP-202ENST00000592932 1624 ntBASIC17.57■□□□□ 0.4
PACS2Q86VP3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PACS2Q86VP3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms