Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASC4Q6P4E1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 AC104076.2-201ENST00000448912 469 ntBASIC17.82■□□□□ 0.44
CASC4Q6P4E1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASC4Q6P4E1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASC4Q6P4E1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CASC4Q6P4E1 AC005104.2-201ENST00000427818 678 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms