Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 AC099398.1-201ENST00000567919 2776 ntBASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTC1Q2NKJ3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 LINC00896-202ENST00000609602 2128 ntBASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 AL020989.1-201ENST00000422979 469 ntBASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTC1Q2NKJ3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 AC096734.2-201ENST00000562054 433 ntBASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 AC004877.2-201ENST00000623941 599 ntBASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 AC132938.6-201ENST00000623828 1655 ntBASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTC1Q2NKJ3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 AC009053.2-201ENST00000563701 2365 ntBASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 AC010654.1-201ENST00000615722 808 ntBASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 AC126763.1-201ENST00000552015 2118 ntBASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.59■□□□□ 0.57
CTC1Q2NKJ3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms