Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6CP48668 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6CP48668 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KRT6CP48668 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6CP48668 IGHV3-52-201ENST00000519770 353 ntBASIC16.94■□□□□ 0.3
KRT6CP48668 AC090616.6-201ENST00000582640 721 ntBASIC16.94■□□□□ 0.3
KRT6CP48668 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6CP48668 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT6CP48668 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 RCN1P1-201ENST00000400413 996 ntBASIC16.93■□□□□ 0.3
KRT6CP48668 TMPOP1-202ENST00000424642 1267 ntBASIC16.93■□□□□ 0.3
KRT6CP48668 RN7SL606P-201ENST00000472779 293 ntBASIC16.93■□□□□ 0.3
KRT6CP48668 AC124864.1-201ENST00000623408 392 ntBASIC16.93■□□□□ 0.3
KRT6CP48668 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT6CP48668 AC046158.3-201ENST00000624947 2558 ntBASIC16.93■□□□□ 0.3
KRT6CP48668 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KRT6CP48668 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT6CP48668 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT6CP48668 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT6CP48668 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6CP48668 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT6CP48668 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.92■□□□□ 0.3
KRT6CP48668 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.92■□□□□ 0.3
KRT6CP48668 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.92■□□□□ 0.3
KRT6CP48668 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.92■□□□□ 0.3
KRT6CP48668 AL136038.3-201ENST00000561909 1096 ntBASIC16.92■□□□□ 0.3
KRT6CP48668 AC011498.5-201ENST00000592027 486 ntBASIC16.92■□□□□ 0.3
KRT6CP48668 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.92■□□□□ 0.3
KRT6CP48668 AL592071.1-201ENST00000611956 408 ntBASIC16.92■□□□□ 0.3
KRT6CP48668 IGHV3-41-201ENST00000613121 348 ntBASIC16.92■□□□□ 0.3
KRT6CP48668 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.92■□□□□ 0.3
KRT6CP48668 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.92■□□□□ 0.3
KRT6CP48668 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.92■□□□□ 0.3
KRT6CP48668 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KRT6CP48668 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.92■□□□□ 0.3
KRT6CP48668 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KRT6CP48668 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KRT6CP48668 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KRT6CP48668 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
KRT6CP48668 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KRT6CP48668 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT6CP48668 PCDHA12-202ENST00000613593 2588 ntBASIC16.91■□□□□ 0.3
KRT6CP48668 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT6CP48668 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT6CP48668 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT6CP48668 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT6CP48668 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT6CP48668 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT6CP48668 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KRT6CP48668 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KRT6CP48668 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT6CP48668 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT6CP48668 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT6CP48668 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.91■□□□□ 0.3
KRT6CP48668 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRT6CP48668 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.91■□□□□ 0.3
KRT6CP48668 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms