Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.675e-7■■□□□ 12.5
MATR3P43243 KIZ-205ENST00000611685 1915 ntAPPRIS ALT2 TSL 216.73■□□□□ 0.275e-7■■□□□ 12.5
MATR3P43243 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.025e-7■■□□□ 12.5
MATR3P43243 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.095e-7■■□□□ 12.5
MATR3P43243 KIZ-210ENST00000619189 2130 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.485e-7■■□□□ 12.5
MATR3P43243 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC9.73□□□□□ -0.855e-7■■□□□ 12.5
MATR3P43243 TROVE2-207ENST00000415442 377 ntTSL 316.82■□□□□ 0.288e-7■■□□□ 12.5
MATR3P43243 TROVE2-209ENST00000460715 1474 ntTSL 316.44■□□□□ 0.228e-7■■□□□ 12.5
MATR3P43243 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC15.26■□□□□ 0.038e-7■■□□□ 12.5
MATR3P43243 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.088e-7■■□□□ 12.5
MATR3P43243 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC13.54□□□□□ -0.248e-7■■□□□ 12.5
MATR3P43243 TROVE2-211ENST00000506303 613 ntTSL 311.68□□□□□ -0.548e-7■■□□□ 12.5
MATR3P43243 TROVE2-202ENST00000367443 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.658e-7■■□□□ 12.5
MATR3P43243 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.88e-7■■□□□ 12.5
MATR3P43243 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.018e-7■■□□□ 12.5
MATR3P43243 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.074e-6■■□□□ 12.5
MATR3P43243 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.074e-6■■□□□ 12.5
MATR3P43243 CCDC93-203ENST00000437999 850 ntTSL 35.66□□□□□ -1.54e-6■■□□□ 12.5
MATR3P43243 CCDC93-205ENST00000466171 477 ntTSL 31.96□□□□□ -2.14e-6■■□□□ 12.5
MATR3P43243 LPCAT1-202ENST00000475622 5610 ntTSL 520.69■□□□□ 0.91e-23■■□□□ 12.5
MATR3P43243 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.091e-23■■□□□ 12.5
MATR3P43243 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.15□□□□□ -1.12e-6■■□□□ 12.4
MATR3P43243 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.77□□□□□ -1.972e-6■■□□□ 12.4
MATR3P43243 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.112e-6■■□□□ 12.4
MATR3P43243 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC12.59□□□□□ -0.399e-7■■□□□ 12.4
MATR3P43243 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.789e-7■■□□□ 12.4
MATR3P43243 NUP214-215ENST00000525980 2274 ntTSL 29.59□□□□□ -0.879e-7■■□□□ 12.4
MATR3P43243 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.929e-7■■□□□ 12.4
MATR3P43243 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.026e-6■■□□□ 12.4
MATR3P43243 RFWD2-207ENST00000474194 975 ntTSL 327.62■■■□□ 2.016e-6■■□□□ 12.4
MATR3P43243 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.986e-6■■□□□ 12.4
MATR3P43243 YAF2-211ENST00000547724 396 ntTSL 326.7■■□□□ 1.866e-6■■□□□ 12.4
MATR3P43243 YAF2-213ENST00000548917 269 ntTSL 226.7■■□□□ 1.866e-6■■□□□ 12.4
MATR3P43243 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.346e-6■■□□□ 12.4
MATR3P43243 ARL13B-208ENST00000486562 681 ntTSL 322.76■■□□□ 1.236e-6■■□□□ 12.4
MATR3P43243 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.126e-6■■□□□ 12.4
MATR3P43243 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.81■■□□□ 1.086e-6■■□□□ 12.4
MATR3P43243 COMMD1-208ENST00000472729 629 ntTSL 321.35■■□□□ 1.016e-6■■□□□ 12.4
MATR3P43243 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.876e-6■■□□□ 12.4
MATR3P43243 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.846e-6■■□□□ 12.4
MATR3P43243 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.796e-6■■□□□ 12.4
MATR3P43243 AP2A2-212ENST00000528195 562 ntTSL 319.68■□□□□ 0.746e-6■■□□□ 12.4
MATR3P43243 YAF2-210ENST00000547622 581 ntTSL 419.52■□□□□ 0.726e-6■■□□□ 12.4
MATR3P43243 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.686e-6■■□□□ 12.4
MATR3P43243 YAF2-208ENST00000547254 571 ntTSL 519.29■□□□□ 0.686e-6■■□□□ 12.4
MATR3P43243 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.586e-6■■□□□ 12.4
MATR3P43243 RPH3AL-221ENST00000577079 814 ntAPPRIS ALT2 TSL 318.44■□□□□ 0.546e-6■■□□□ 12.4
MATR3P43243 RPH3AL-220ENST00000576420 820 ntAPPRIS ALT2 TSL 317.53■□□□□ 0.46e-6■■□□□ 12.4
MATR3P43243 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.366e-6■■□□□ 12.4
MATR3P43243 RPH3AL-215ENST00000574953 692 ntAPPRIS ALT2 TSL 517.25■□□□□ 0.356e-6■■□□□ 12.4
MATR3P43243 RPH3AL-219ENST00000576001 647 ntTSL 317.07■□□□□ 0.326e-6■■□□□ 12.4
MATR3P43243 YAF2-217ENST00000552109 1034 ntTSL 217■□□□□ 0.316e-6■■□□□ 12.4
MATR3P43243 YAF2-218ENST00000552928 545 ntTSL 317■□□□□ 0.316e-6■■□□□ 12.4
MATR3P43243 TMEM243-206ENST00000474074 1031 ntTSL 216.92■□□□□ 0.36e-6■■□□□ 12.4
MATR3P43243 RPH3AL-204ENST00000570638 537 ntTSL 516.88■□□□□ 0.296e-6■■□□□ 12.4
MATR3P43243 RPH3AL-214ENST00000574722 586 ntTSL 416.88■□□□□ 0.296e-6■■□□□ 12.4
MATR3P43243 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.85■□□□□ 0.296e-6■■□□□ 12.4
MATR3P43243 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.84■□□□□ 0.296e-6■■□□□ 12.4
MATR3P43243 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.68■□□□□ 0.266e-6■■□□□ 12.4
MATR3P43243 FAM102A-205ENST00000479828 366 ntTSL 516.66■□□□□ 0.266e-6■■□□□ 12.4
MATR3P43243 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.246e-6■■□□□ 12.4
MATR3P43243 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.196e-6■■□□□ 12.4
MATR3P43243 YAF2-209ENST00000547351 807 ntTSL 215.86■□□□□ 0.136e-6■■□□□ 12.4
MATR3P43243 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.046e-6■■□□□ 12.4
MATR3P43243 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.28■□□□□ 0.046e-6■■□□□ 12.4
MATR3P43243 COMMD1-206ENST00000458337 770 ntTSL 514.53□□□□□ -0.086e-6■■□□□ 12.4
MATR3P43243 TGFBR3-203ENST00000417833 551 ntTSL 414.42□□□□□ -0.16e-6■■□□□ 12.4
MATR3P43243 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC14.28□□□□□ -0.126e-6■■□□□ 12.4
MATR3P43243 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.186e-6■■□□□ 12.4
MATR3P43243 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.93□□□□□ -0.186e-6■■□□□ 12.4
MATR3P43243 FAM102A-206ENST00000493175 423 ntTSL 313.83□□□□□ -0.26e-6■■□□□ 12.4
MATR3P43243 ARL13B-202ENST00000335438 3659 ntTSL 1 (best)13.67□□□□□ -0.226e-6■■□□□ 12.4
MATR3P43243 ARL13B-204ENST00000460371 3203 ntTSL 1 (best)13.55□□□□□ -0.246e-6■■□□□ 12.4
MATR3P43243 RPH3AL-206ENST00000570954 568 ntTSL 413.44□□□□□ -0.266e-6■■□□□ 12.4
MATR3P43243 TGFBR3-211ENST00000533370 563 ntTSL 413.36□□□□□ -0.276e-6■■□□□ 12.4
MATR3P43243 YAF2-203ENST00000534854 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.346e-6■■□□□ 12.4
MATR3P43243 TRIM26-268ENST00000454678 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.376e-6■■□□□ 12.4
MATR3P43243 YAF2-215ENST00000551268 702 ntTSL 512.33□□□□□ -0.446e-6■■□□□ 12.4
MATR3P43243 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC12.16□□□□□ -0.466e-6■■□□□ 12.4
MATR3P43243 TRIM26-266ENST00000437089 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.476e-6■■□□□ 12.4
MATR3P43243 AMBRA1-204ENST00000526545 837 ntTSL 312.1□□□□□ -0.476e-6■■□□□ 12.4
MATR3P43243 HERC2P2-202ENST00000614571 578 ntTSL 411.65□□□□□ -0.546e-6■■□□□ 12.4
MATR3P43243 PRPF4B-206ENST00000481109 2364 ntTSL 1 (best)11.36□□□□□ -0.596e-6■■□□□ 12.4
MATR3P43243 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.616e-6■■□□□ 12.4
MATR3P43243 COMMD1-202ENST00000427417 785 ntTSL 511.13□□□□□ -0.636e-6■■□□□ 12.4
MATR3P43243 CAMK2D-203ENST00000379773 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.716e-6■■□□□ 12.4
MATR3P43243 CAMK2D-208ENST00000508738 1470 ntTSL 1 (best) BASIC10.45□□□□□ -0.746e-6■■□□□ 12.4
MATR3P43243 GLB1-212ENST00000467571 517 ntTSL 310.19□□□□□ -0.786e-6■■□□□ 12.4
MATR3P43243 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC9.25□□□□□ -0.936e-6■■□□□ 12.4
MATR3P43243 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.946e-6■■□□□ 12.4
MATR3P43243 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC9.08□□□□□ -0.966e-6■■□□□ 12.4
MATR3P43243 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC9.01□□□□□ -0.976e-6■■□□□ 12.4
MATR3P43243 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.85□□□□□ -0.991e-6■■□□□ 12.4
MATR3P43243 CHD6-207ENST00000476641 862 ntTSL 28.6□□□□□ -1.031e-6■■□□□ 12.4
MATR3P43243 G2E3-208ENST00000549553 587 ntTSL 28.42□□□□□ -1.064e-11■■□□□ 12.4
MATR3P43243 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.4□□□□□ -1.226e-6■■□□□ 12.4
MATR3P43243 YAF2-212ENST00000548661 434 ntTSL 37.39□□□□□ -1.236e-6■■□□□ 12.4
MATR3P43243 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)6.89□□□□□ -1.316e-6■■□□□ 12.4
MATR3P43243 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.7□□□□□ -1.346e-6■■□□□ 12.4
MATR3P43243 AFF4-207ENST00000477369 728 ntTSL 56.39□□□□□ -1.396e-6■■□□□ 12.4
Retrieved 100 of 16,209 protein–RNA pairs in 90.4 ms