RNA–Protein interactions for RNA: ENST00000367443.5

TROVE2-202, Transcript of TROVE domain family member 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TROVE2, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-202ENST00000367443 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
TROVE2-202ENST00000367443 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
TROVE2-202ENST00000367443 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.4
TROVE2-202ENST00000367443 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
TROVE2-202ENST00000367443 ABCC9O60706 1549 aa17.38■□□□□ 0.37
TROVE2-202ENST00000367443 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
TROVE2-202ENST00000367443 NACADO15069 1562 aa17.21■□□□□ 0.34
TROVE2-202ENST00000367443 SHROOM4Q9ULL8 1493 aa17.11■□□□□ 0.33
TROVE2-202ENST00000367443 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
TROVE2-202ENST00000367443 RB1CC1Q8TDY2 1594 aa17.09■□□□□ 0.33
TROVE2-202ENST00000367443 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
TROVE2-202ENST00000367443 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
TROVE2-202ENST00000367443 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
TROVE2-202ENST00000367443 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
TROVE2-202ENST00000367443 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
TROVE2-202ENST00000367443 HRCP23327 699 aa16.57■□□□□ 0.24
TROVE2-202ENST00000367443 BICRAQ9NZM4 1560 aa16.46■□□□□ 0.23
TROVE2-202ENST00000367443 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
TROVE2-202ENST00000367443 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
TROVE2-202ENST00000367443 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
TROVE2-202ENST00000367443 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
TROVE2-202ENST00000367443 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
TROVE2-202ENST00000367443 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
TROVE2-202ENST00000367443 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
TROVE2-202ENST00000367443 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
TROVE2-202ENST00000367443 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
TROVE2-202ENST00000367443 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.15
TROVE2-202ENST00000367443 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.15
TROVE2-202ENST00000367443 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
TROVE2-202ENST00000367443 WIZO95785 1651 aa15.96■□□□□ 0.14
TROVE2-202ENST00000367443 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
TROVE2-202ENST00000367443 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
TROVE2-202ENST00000367443 ATAD2BQ9ULI0 1458 aa15.88■□□□□ 0.13
TROVE2-202ENST00000367443 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
TROVE2-202ENST00000367443 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
TROVE2-202ENST00000367443 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
TROVE2-202ENST00000367443 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
TROVE2-202ENST00000367443 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
TROVE2-202ENST00000367443 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
TROVE2-202ENST00000367443 CCDC88BA6NC98 1476 aa15.62■□□□□ 0.09
TROVE2-202ENST00000367443 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
TROVE2-202ENST00000367443 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
TROVE2-202ENST00000367443 PRDM2Q13029 1718 aa15.45■□□□□ 0.06
TROVE2-202ENST00000367443 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
TROVE2-202ENST00000367443 CFTRP13569 1480 aa15.4■□□□□ 0.06
TROVE2-202ENST00000367443 PELP1Q8IZL8 1130 aaKnown RBP15.39■□□□□ 0.05
TROVE2-202ENST00000367443 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
TROVE2-202ENST00000367443 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
TROVE2-202ENST00000367443 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
TROVE2-202ENST00000367443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
TROVE2-202ENST00000367443 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.03
TROVE2-202ENST00000367443 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.02
TROVE2-202ENST00000367443 ABCC8Q09428 1581 aa15.21■□□□□ 0.02
TROVE2-202ENST00000367443 FANCD2Q9BXW9 1451 aa15.19■□□□□ 0.02
TROVE2-202ENST00000367443 ACIN1Q9UKV3 1341 aaKnown RBP15.19■□□□□ 0.02
TROVE2-202ENST00000367443 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
TROVE2-202ENST00000367443 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
TROVE2-202ENST00000367443 NESP48681 1621 aa15.17■□□□□ 0.02
TROVE2-202ENST00000367443 NEUROD1Q13562 356 aa15.17■□□□□ 0.02
TROVE2-202ENST00000367443 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
TROVE2-202ENST00000367443 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
TROVE2-202ENST00000367443 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
TROVE2-202ENST00000367443 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
TROVE2-202ENST00000367443 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
TROVE2-202ENST00000367443 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
TROVE2-202ENST00000367443 CUX1P39880 1505 aa15.08■□□□□ 0.01
TROVE2-202ENST00000367443 SOGA1O94964 1423 aa15.08■□□□□ 0
TROVE2-202ENST00000367443 DIEXFQ68CQ4 756 aaKnown RBP15.07■□□□□ 0
TROVE2-202ENST00000367443 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
TROVE2-202ENST00000367443 EEA1Q15075 1411 aa15.03■□□□□ -0
TROVE2-202ENST00000367443 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
TROVE2-202ENST00000367443 RUSC2Q8N2Y8 1516 aa15.02□□□□□ -0.01
TROVE2-202ENST00000367443 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
TROVE2-202ENST00000367443 TTBK1Q5TCY1 1321 aaPredicted RBP15.01□□□□□ -0.01
TROVE2-202ENST00000367443 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
TROVE2-202ENST00000367443 ERCC6Q03468 1493 aa15□□□□□ -0.01
TROVE2-202ENST00000367443 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
TROVE2-202ENST00000367443 URB2Q14146 1524 aaKnown RBP14.98□□□□□ -0.01
TROVE2-202ENST00000367443 WDR62O43379 1518 aa14.96□□□□□ -0.01
TROVE2-202ENST00000367443 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
TROVE2-202ENST00000367443 FGD5Q6ZNL6 1462 aa14.96□□□□□ -0.01
TROVE2-202ENST00000367443 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
TROVE2-202ENST00000367443 GOLGA3Q08378 1498 aa14.93□□□□□ -0.02
TROVE2-202ENST00000367443 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
TROVE2-202ENST00000367443 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
TROVE2-202ENST00000367443 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
TROVE2-202ENST00000367443 WDR97A6NE52 1622 aa14.88□□□□□ -0.03
TROVE2-202ENST00000367443 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
TROVE2-202ENST00000367443 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
TROVE2-202ENST00000367443 KIF21BO75037 1637 aa14.86□□□□□ -0.03
TROVE2-202ENST00000367443 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
TROVE2-202ENST00000367443 CUX2O14529 1486 aa14.82□□□□□ -0.04
TROVE2-202ENST00000367443 IFT140Q96RY7 1462 aa14.82□□□□□ -0.04
TROVE2-202ENST00000367443 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
TROVE2-202ENST00000367443 ABCA5Q8WWZ7 1642 aa14.78□□□□□ -0.04
TROVE2-202ENST00000367443 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
TROVE2-202ENST00000367443 MIER1Q8N108 512 aa14.76□□□□□ -0.05
TROVE2-202ENST00000367443 CLIP1P30622 1438 aa14.76□□□□□ -0.05
TROVE2-202ENST00000367443 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
TROVE2-202ENST00000367443 CUL7Q14999 1698 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms