RNA–Protein interactions for RNA: ENST00000474194.1

RFWD2-207, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-207ENST00000474194 NISCHQ9Y2I1 1504 aa60.81■■■■■ 7.32
RFWD2-207ENST00000474194 CCDC180Q9P1Z9 1646 aa53.91■■■■■ 6.22
RFWD2-207ENST00000474194 ABCC9O60706 1549 aa52.35■■■■■ 5.97
RFWD2-207ENST00000474194 ZCCHC6Q5VYS8 1495 aaKnown RBP50.76■■■■■ 5.72
RFWD2-207ENST00000474194 DCAF8L2P0C7V8 631 aa50.57■■■■■ 5.69
RFWD2-207ENST00000474194 NACADO15069 1562 aa50.55■■■■■ 5.68
RFWD2-207ENST00000474194 RB1CC1Q8TDY2 1594 aa50.51■■■■■ 5.68
RFWD2-207ENST00000474194 MYO15BQ96JP2 1530 aa50.37■■■■■ 5.65
RFWD2-207ENST00000474194 DCAF1Q9Y4B6 1507 aa50.32■■■■■ 5.65
RFWD2-207ENST00000474194 UNC13AQ9UPW8 1703 aa49.47■■■■■ 5.51
RFWD2-207ENST00000474194 SCRIBQ14160 1630 aa49.23■■■■■ 5.47
RFWD2-207ENST00000474194 BICRAQ9NZM4 1560 aa49.03■■■■■ 5.44
RFWD2-207ENST00000474194 PABPN1Q86U42 306 aaKnown RBP eCLIP48.96■■■■■ 5.43
RFWD2-207ENST00000474194 SHROOM4Q9ULL8 1493 aa48.48■■■■■ 5.35
RFWD2-207ENST00000474194 DNAJC5BQ9UF47 199 aa47.69■■■■■ 5.22
RFWD2-207ENST00000474194 EIF4G1Q04637 1599 aaKnown RBP47.68■■■■■ 5.22
RFWD2-207ENST00000474194 CC2D2AQ9P2K1 1620 aa47.4■■■■■ 5.18
RFWD2-207ENST00000474194 CECR2Q9BXF3 1484 aa47.34■■■■■ 5.17
RFWD2-207ENST00000474194 SMARCA4P51532 1647 aa47.12■■■■■ 5.13
RFWD2-207ENST00000474194 BAZ1AQ9NRL2 1556 aaPredicted RBP47.09■■■■■ 5.13
RFWD2-207ENST00000474194 MROH2BQ7Z745 1585 aa46.89■■■■■ 5.1
RFWD2-207ENST00000474194 ATAD2BQ9ULI0 1458 aa46.75■■■■■ 5.07
RFWD2-207ENST00000474194 SMARCA2P51531 1590 aa46.69■■■■■ 5.07
RFWD2-207ENST00000474194 PEG3Q9GZU2 1588 aa46.64■■■■■ 5.06
RFWD2-207ENST00000474194 NCAPD3P42695 1498 aa46.63■■■■■ 5.06
RFWD2-207ENST00000474194 HMGXB3Q12766 1538 aa46.48■■■■■ 5.03
RFWD2-207ENST00000474194 RSF1Q96T23 1441 aaPredicted RBP46.47■■■■■ 5.03
RFWD2-207ENST00000474194 WIZO95785 1651 aa46.43■■■■■ 5.02
RFWD2-207ENST00000474194 BAZ1BQ9UIG0 1483 aaKnown RBP46.38■■■■■ 5.01
RFWD2-207ENST00000474194 TOP2AP11388 1531 aaKnown RBP45.93■■■■■ 4.94
RFWD2-207ENST00000474194 SUPT5HO00267 1087 aaKnown RBP45.55■■■■■ 4.88
RFWD2-207ENST00000474194 NESP48681 1621 aa45.44■■■■■ 4.87
RFWD2-207ENST00000474194 CCDC88BA6NC98 1476 aa45.37■■■■■ 4.85
RFWD2-207ENST00000474194 LAMC3Q9Y6N6 1575 aa45.36■■■■■ 4.85
RFWD2-207ENST00000474194 CADPSQ9ULU8 1353 aa45.29■■■■■ 4.84
RFWD2-207ENST00000474194 CFTRP13569 1480 aa45.13■■■■■ 4.82
RFWD2-207ENST00000474194 ERCC6Q03468 1493 aa45.06■■■■■ 4.8
RFWD2-207ENST00000474194 PDS5BQ9NTI5 1447 aa45.01■■■■■ 4.8
RFWD2-207ENST00000474194 KIF21AQ7Z4S6 1674 aa44.95■■■■■ 4.79
RFWD2-207ENST00000474194 PRDM2Q13029 1718 aa44.89■■■■■ 4.78
RFWD2-207ENST00000474194 FANCD2Q9BXW9 1451 aa44.79■■■■■ 4.76
RFWD2-207ENST00000474194 CEP164Q9UPV0 1460 aa44.7■■■■■ 4.75
RFWD2-207ENST00000474194 THOC2Q8NI27 1593 aaKnown RBP44.69■■■■■ 4.75
RFWD2-207ENST00000474194 MRC2Q9UBG0 1479 aa44.56■■■■■ 4.72
RFWD2-207ENST00000474194 CUX2O14529 1486 aa44.45■■■■■ 4.71
RFWD2-207ENST00000474194 WDR62O43379 1518 aa44.42■■■■■ 4.7
RFWD2-207ENST00000474194 URB2Q14146 1524 aaKnown RBP44.34■■■■■ 4.69
RFWD2-207ENST00000474194 TOPBP1Q92547 1522 aa44.14■■■■■ 4.66
RFWD2-207ENST00000474194 DNMBPQ6XZF7 1577 aa44.13■■■■■ 4.65
RFWD2-207ENST00000474194 ABCC8Q09428 1581 aa44.09■■■■■ 4.65
RFWD2-207ENST00000474194 CUX1P39880 1505 aa43.98■■■■■ 4.63
RFWD2-207ENST00000474194 WRNQ14191 1432 aaPredicted RBP eCLIP43.8■■■■■ 4.6
RFWD2-207ENST00000474194 POLA1P09884 1462 aaPredicted RBP43.79■■■■■ 4.6
RFWD2-207ENST00000474194 FGD5Q6ZNL6 1462 aa43.75■■■■■ 4.59
RFWD2-207ENST00000474194 IFT140Q96RY7 1462 aa43.73■■■■■ 4.59
RFWD2-207ENST00000474194 SYNJ1O43426 1573 aa43.72■■■■■ 4.59
RFWD2-207ENST00000474194 BIVM-ERCC5R4GMW8 1640 aa43.7■■■■■ 4.59
RFWD2-207ENST00000474194 TOP2BQ02880 1626 aa43.69■■■■■ 4.58
RFWD2-207ENST00000474194 TARBP1Q13395 1621 aaKnown RBP43.65■■■■■ 4.58
RFWD2-207ENST00000474194 RAD54L2Q9Y4B4 1467 aa43.6■■■■■ 4.57
RFWD2-207ENST00000474194 SOGA1O94964 1423 aa43.57■■■■■ 4.57
RFWD2-207ENST00000474194 ZNF608Q9ULD9 1512 aaPredicted RBP43.54■■■■■ 4.56
RFWD2-207ENST00000474194 WDR97A6NE52 1622 aa43.41■■■■■ 4.54
RFWD2-207ENST00000474194 EIF4G3O43432 1585 aaKnown RBP43.41■■■■■ 4.54
RFWD2-207ENST00000474194 ABCA10Q8WWZ4 1543 aa43.33■■■■■ 4.53
RFWD2-207ENST00000474194 AQRO60306 1485 aaKnown RBP eCLIP43.32■■■■■ 4.53
RFWD2-207ENST00000474194 TDRD9Q8NDG6 1382 aaKnown RBP43.29■■■■■ 4.52
RFWD2-207ENST00000474194 ABCA5Q8WWZ7 1642 aa43.15■■■■■ 4.5
RFWD2-207ENST00000474194 GAPVD1Q14C86 1478 aa43.1■■■■■ 4.49
RFWD2-207ENST00000474194 PBRM1Q86U86 1689 aa43.05■■■■■ 4.48
RFWD2-207ENST00000474194 GRIN2BQ13224 1484 aa43.03■■■■■ 4.48
RFWD2-207ENST00000474194 TRIM41Q8WV44 630 aa42.99■■■■■ 4.47
RFWD2-207ENST00000474194 SNAPC4Q5SXM2 1469 aa42.95■■■■■ 4.47
RFWD2-207ENST00000474194 MAGI1Q96QZ7 1491 aaPredicted RBP42.88■■■■■ 4.46
RFWD2-207ENST00000474194 KIF27Q86VH2 1401 aa42.83■■■■■ 4.45
RFWD2-207ENST00000474194 ERICH3Q5RHP9 1530 aa42.81■■■■■ 4.44
RFWD2-207ENST00000474194 CHD1O14646 1710 aa42.8■■■■■ 4.44
RFWD2-207ENST00000474194 CHIC1Q5VXU3 224 aa42.76■■■■■ 4.44
RFWD2-207ENST00000474194 SYNJ2O15056 1496 aa42.72■■■■■ 4.43
RFWD2-207ENST00000474194 ADAMTS12P58397 1594 aa42.72■■■■■ 4.43
RFWD2-207ENST00000474194 FBLN2P98095 1184 aa42.67■■■■■ 4.42
RFWD2-207ENST00000474194 OSCARQ8IYS5 282 aa42.63■■■■■ 4.41
RFWD2-207ENST00000474194 RUSC2Q8N2Y8 1516 aa42.62■■■■■ 4.41
RFWD2-207ENST00000474194 IGF1RP08069 1367 aa42.62■■■■■ 4.41
RFWD2-207ENST00000474194 CHMP7Q8WUX9 453 aaPredicted RBP42.61■■■■■ 4.41
RFWD2-207ENST00000474194 FHAD1B1AJZ9 1412 aa42.6■■■■■ 4.41
RFWD2-207ENST00000474194 DNAJC5Q9H3Z4 198 aa42.59■■■■■ 4.41
RFWD2-207ENST00000474194 CUL7Q14999 1698 aa42.52■■■■■ 4.4
RFWD2-207ENST00000474194 GRIN2AQ12879 1464 aa42.49■■■■■ 4.39
RFWD2-207ENST00000474194 CARMIL1Q5VZK9 1371 aa42.37■■■■■ 4.37
RFWD2-207ENST00000474194 CLASP1Q7Z460 1538 aa42.32■■■■■ 4.37
RFWD2-207ENST00000474194 NUP160Q12769 1436 aa42.3■■■■■ 4.36
RFWD2-207ENST00000474194 CEP170Q5SW79 1584 aa42.3■■■■■ 4.36
RFWD2-207ENST00000474194 EEA1Q15075 1411 aa42.26■■■■■ 4.36
RFWD2-207ENST00000474194 RAPGEF2Q9Y4G8 1499 aa42.17■■■■■ 4.34
RFWD2-207ENST00000474194 CSRNP3Q8WYN3 585 aa42.14■■■■■ 4.34
RFWD2-207ENST00000474194 PRXQ9BXM0 1461 aa42.14■■■■■ 4.34
RFWD2-207ENST00000474194 FAM9AQ8IZU1 332 aaPredicted RBP42.11■■■■■ 4.33
RFWD2-207ENST00000474194 ARHGEF11O15085 1522 aa42.02■■■■■ 4.32
RFWD2-207ENST00000474194 RIMBP3CA6NJZ7 1639 aa42■■■■■ 4.31
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms