Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 PCDH8P1-201ENST00000428983 2773 ntBASIC13.7□□□□□ -0.22
TOMM40O96008 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TOMM40O96008 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 MIR662-201ENST00000384847 95 ntBASIC13.7□□□□□ -0.22
TOMM40O96008 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.7□□□□□ -0.22
TOMM40O96008 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.7□□□□□ -0.22
TOMM40O96008 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.7□□□□□ -0.22
TOMM40O96008 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 GPR32P1-201ENST00000601788 811 ntBASIC13.7□□□□□ -0.22
TOMM40O96008 AC139887.4-201ENST00000607877 719 ntBASIC13.7□□□□□ -0.22
TOMM40O96008 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.7□□□□□ -0.22
TOMM40O96008 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TOMM40O96008 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.7□□□□□ -0.22
TOMM40O96008 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TOMM40O96008 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TOMM40O96008 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TOMM40O96008 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 TERF1P1-201ENST00000311003 1181 ntBASIC13.69□□□□□ -0.22
TOMM40O96008 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 MTCL1P1-201ENST00000446207 792 ntBASIC13.69□□□□□ -0.22
TOMM40O96008 HOMER2P1-201ENST00000455653 964 ntBASIC13.69□□□□□ -0.22
TOMM40O96008 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.69□□□□□ -0.22
TOMM40O96008 AC092597.1-201ENST00000487352 616 ntBASIC13.69□□□□□ -0.22
TOMM40O96008 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.69□□□□□ -0.22
TOMM40O96008 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.69□□□□□ -0.22
TOMM40O96008 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.69□□□□□ -0.22
TOMM40O96008 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 AC133561.5-201ENST00000635547 218 ntBASIC13.69□□□□□ -0.22
TOMM40O96008 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.69□□□□□ -0.22
TOMM40O96008 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.69□□□□□ -0.22
TOMM40O96008 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TOMM40O96008 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TOMM40O96008 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TOMM40O96008 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.69□□□□□ -0.22
TOMM40O96008 PKD1P5-201ENST00000532415 10291 ntBASIC13.69□□□□□ -0.22
TOMM40O96008 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TOMM40O96008 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.68□□□□□ -0.22
TOMM40O96008 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.68□□□□□ -0.22
TOMM40O96008 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms