Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 AC133552.6-201ENST00000613406 534 ntBASIC7.69□□□□□ -1.18
USH2AO75445 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC7.69□□□□□ -1.18
USH2AO75445 AC093525.8-201ENST00000624099 1342 ntBASIC7.69□□□□□ -1.18
USH2AO75445 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
USH2AO75445 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
USH2AO75445 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 COX5BP2-201ENST00000392354 334 ntBASIC7.68□□□□□ -1.18
USH2AO75445 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 RAB34-223ENST00000636154 730 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 AC141586.3-201ENST00000562166 1838 ntBASIC7.68□□□□□ -1.18
USH2AO75445 WASH6P-202ENST00000359512 1437 ntBASIC7.68□□□□□ -1.18
USH2AO75445 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 USB1-202ENST00000423271 1217 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC7.68□□□□□ -1.18
USH2AO75445 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 AC079328.1-201ENST00000560358 952 ntBASIC7.68□□□□□ -1.18
USH2AO75445 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
USH2AO75445 SP100-208ENST00000427101 1922 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 AC253536.4-201ENST00000440539 267 ntBASIC7.68□□□□□ -1.18
USH2AO75445 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC7.68□□□□□ -1.18
USH2AO75445 MYCLP2-201ENST00000449268 967 ntBASIC7.68□□□□□ -1.18
USH2AO75445 CROCCP4-201ENST00000457096 498 ntBASIC7.68□□□□□ -1.18
USH2AO75445 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC7.68□□□□□ -1.18
USH2AO75445 AL844908.2-201ENST00000609461 460 ntBASIC7.68□□□□□ -1.18
USH2AO75445 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
USH2AO75445 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
USH2AO75445 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
USH2AO75445 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
USH2AO75445 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 ELK1P1-201ENST00000485699 580 ntBASIC7.67□□□□□ -1.18
USH2AO75445 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 AC093484.2-201ENST00000580996 2166 ntBASIC7.67□□□□□ -1.18
USH2AO75445 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC7.67□□□□□ -1.18
USH2AO75445 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC7.67□□□□□ -1.18
USH2AO75445 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 AP3S2-216ENST00000617003 1561 ntBASIC7.67□□□□□ -1.18
USH2AO75445 AL032819.2-201ENST00000624543 2162 ntBASIC7.67□□□□□ -1.18
USH2AO75445 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
USH2AO75445 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC7.67□□□□□ -1.18
USH2AO75445 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
USH2AO75445 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms