Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.77■□□□□ 0.28
GFRA3O60609 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GFRA3O60609 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.77■□□□□ 0.28
GFRA3O60609 AC120057.1-201ENST00000483947 663 ntBASIC16.77■□□□□ 0.28
GFRA3O60609 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.77■□□□□ 0.28
GFRA3O60609 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.77■□□□□ 0.28
GFRA3O60609 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
GFRA3O60609 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFRA3O60609 AC018529.1-201ENST00000613063 361 ntBASIC16.77■□□□□ 0.28
GFRA3O60609 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.77■□□□□ 0.28
GFRA3O60609 AL139099.5-201ENST00000635274 300 ntBASIC16.77■□□□□ 0.28
GFRA3O60609 AC004840.1-201ENST00000636359 365 ntBASIC16.77■□□□□ 0.28
GFRA3O60609 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.77■□□□□ 0.28
GFRA3O60609 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.77■□□□□ 0.28
GFRA3O60609 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GFRA3O60609 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GFRA3O60609 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 MIR346-201ENST00000362234 95 ntBASIC16.76■□□□□ 0.27
GFRA3O60609 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.76■□□□□ 0.27
GFRA3O60609 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.76■□□□□ 0.27
GFRA3O60609 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.76■□□□□ 0.27
GFRA3O60609 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GFRA3O60609 AC087163.2-201ENST00000457299 853 ntBASIC16.76■□□□□ 0.27
GFRA3O60609 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.76■□□□□ 0.27
GFRA3O60609 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 AC135586.1-201ENST00000539323 574 ntBASIC16.76■□□□□ 0.27
GFRA3O60609 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.76■□□□□ 0.27
GFRA3O60609 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.76■□□□□ 0.27
GFRA3O60609 AL009183.1-201ENST00000603760 355 ntBASIC16.76■□□□□ 0.27
GFRA3O60609 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GFRA3O60609 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.76■□□□□ 0.27
GFRA3O60609 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GFRA3O60609 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GFRA3O60609 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.75■□□□□ 0.27
GFRA3O60609 AC087499.5-201ENST00000452760 1342 ntBASIC16.75■□□□□ 0.27
GFRA3O60609 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.75■□□□□ 0.27
GFRA3O60609 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.75■□□□□ 0.27
GFRA3O60609 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.75■□□□□ 0.27
GFRA3O60609 BOLA2P3-201ENST00000404566 256 ntBASIC16.75■□□□□ 0.27
GFRA3O60609 ACTG1P4-201ENST00000425123 1122 ntBASIC16.75■□□□□ 0.27
GFRA3O60609 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.75■□□□□ 0.27
GFRA3O60609 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.75■□□□□ 0.27
GFRA3O60609 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GFRA3O60609 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.75■□□□□ 0.27
GFRA3O60609 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
GFRA3O60609 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GFRA3O60609 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.75■□□□□ 0.27
GFRA3O60609 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GFRA3O60609 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GFRA3O60609 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.75■□□□□ 0.27
GFRA3O60609 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GFRA3O60609 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GFRA3O60609 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GFRA3O60609 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GFRA3O60609 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms