Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC188H7C350 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC188H7C350 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 MTCL1P1-201ENST00000446207 792 ntBASIC18.15■□□□□ 0.5
CCDC188H7C350 AC008550.1-201ENST00000511500 884 ntBASIC18.15■□□□□ 0.5
CCDC188H7C350 GCSHP2-201ENST00000560971 527 ntBASIC18.15■□□□□ 0.5
CCDC188H7C350 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC188H7C350 AC079602.3-201ENST00000623931 403 ntBASIC18.15■□□□□ 0.5
CCDC188H7C350 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CCDC188H7C350 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC188H7C350 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCDC188H7C350 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC188H7C350 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC188H7C350 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.14■□□□□ 0.5
CCDC188H7C350 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CCDC188H7C350 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
CCDC188H7C350 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
CCDC188H7C350 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CCDC188H7C350 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC188H7C350 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC188H7C350 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 COX5BP2-201ENST00000392354 334 ntBASIC18.14■□□□□ 0.49
CCDC188H7C350 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC188H7C350 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CCDC188H7C350 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC188H7C350 RASA4DP-201ENST00000460726 1199 ntBASIC18.14■□□□□ 0.49
CCDC188H7C350 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC188H7C350 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC188H7C350 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC188H7C350 AC097374.2-201ENST00000618617 1306 ntBASIC18.14■□□□□ 0.49
CCDC188H7C350 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC188H7C350 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC188H7C350 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC188H7C350 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC188H7C350 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC188H7C350 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC188H7C350 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CCDC188H7C350 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC188H7C350 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC188H7C350 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC188H7C350 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC188H7C350 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CCDC188H7C350 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC188H7C350 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CCDC188H7C350 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC188H7C350 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC188H7C350 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
CCDC188H7C350 AC006449.5-201ENST00000610658 2098 ntBASIC18.13■□□□□ 0.49
CCDC188H7C350 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms