Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 AC092364.2-201ENST00000596710 2692 ntBASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAPPC1Q9Y5R8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 KRT8P41-201ENST00000533985 1514 ntBASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 PBX2P1-201ENST00000493219 1291 ntBASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 AL121832.2-201ENST00000610979 668 ntBASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRAPPC1Q9Y5R8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 KRT17P1-201ENST00000399211 1546 ntBASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 AC069236.1-201ENST00000604339 616 ntBASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAPPC1Q9Y5R8 SDHAP2-201ENST00000455183 2001 ntBASIC13.23□□□□□ -0.29
TRAPPC1Q9Y5R8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAPPC1Q9Y5R8 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAPPC1Q9Y5R8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAPPC1Q9Y5R8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAPPC1Q9Y5R8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms