Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.96■□□□□ 0.31
NDE1Q9NXR1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NDE1Q9NXR1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 LINC00167-201ENST00000530583 1419 ntBASIC16.95■□□□□ 0.3
NDE1Q9NXR1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDE1Q9NXR1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 AL355355.2-201ENST00000442321 338 ntBASIC16.94■□□□□ 0.3
NDE1Q9NXR1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NDE1Q9NXR1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 AC079328.2-201ENST00000561241 3354 ntBASIC16.93■□□□□ 0.3
NDE1Q9NXR1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.93■□□□□ 0.3
NDE1Q9NXR1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms