Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 AL391005.1-201ENST00000623953 2435 ntBASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 DDX43P3-201ENST00000441064 443 ntBASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 AL359075.1-203ENST00000462729 1002 ntBASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 AL691432.3-201ENST00000621860 400 ntBASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.65■□□□□ 0.26
CCM2LQ9NUG4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CCM2LQ9NUG4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 LINC00167-201ENST00000530583 1419 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 SLC25A1P2-201ENST00000430693 912 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AC007663.1-201ENST00000438948 1240 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 HOMER2P1-201ENST00000455653 964 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AL671277.2-201ENST00000458060 996 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AC010653.2-201ENST00000623505 997 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 AC011270.2-201ENST00000624293 2550 ntBASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.64■□□□□ 0.25
CCM2LQ9NUG4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms