Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 IGLL3P-201ENST00000412472 434 ntBASIC20.98■□□□□ 0.95
SALL1Q9NSC2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 OR7E47P-204ENST00000575924 449 ntBASIC20.98■□□□□ 0.95
SALL1Q9NSC2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 AC010327.4-202ENST00000591484 748 ntBASIC20.98■□□□□ 0.95
SALL1Q9NSC2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.98■□□□□ 0.95
SALL1Q9NSC2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 LINC00304-203ENST00000565008 1864 ntBASIC20.97■□□□□ 0.95
SALL1Q9NSC2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 AL135999.2-201ENST00000622438 1686 ntBASIC20.97■□□□□ 0.95
SALL1Q9NSC2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 AC002310.6-201ENST00000624451 1377 ntBASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 MRPL20P1-201ENST00000400819 433 ntBASIC20.97■□□□□ 0.95
SALL1Q9NSC2 MCCD1P2-201ENST00000423228 335 ntBASIC20.97■□□□□ 0.95
SALL1Q9NSC2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 AC055717.3-201ENST00000622967 595 ntBASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SALL1Q9NSC2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 AC023274.1-201ENST00000418278 595 ntBASIC20.96■□□□□ 0.95
SALL1Q9NSC2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 AC112482.1-201ENST00000492080 688 ntBASIC20.96■□□□□ 0.95
SALL1Q9NSC2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL1Q9NSC2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SALL1Q9NSC2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.95■□□□□ 0.94
SALL1Q9NSC2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 MTDHP5-201ENST00000598980 586 ntBASIC20.95■□□□□ 0.94
SALL1Q9NSC2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SALL1Q9NSC2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms