Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.59■□□□□ 0.25
BBS4Q96RK4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
BBS4Q96RK4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
BBS4Q96RK4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BBS4Q96RK4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.58■□□□□ 0.25
BBS4Q96RK4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 KRT18P35-201ENST00000510488 1269 ntBASIC16.58■□□□□ 0.24
BBS4Q96RK4 IGHV3-52-201ENST00000519770 353 ntBASIC16.58■□□□□ 0.24
BBS4Q96RK4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.58■□□□□ 0.24
BBS4Q96RK4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
BBS4Q96RK4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BBS4Q96RK4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 LYSMD4-203ENST00000378904 2122 ntBASIC16.57■□□□□ 0.24
BBS4Q96RK4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 Z69720.1-201ENST00000601483 472 ntBASIC16.57■□□□□ 0.24
BBS4Q96RK4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.57■□□□□ 0.24
BBS4Q96RK4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BBS4Q96RK4 AC108860.2-201ENST00000562760 2183 ntBASIC16.57■□□□□ 0.24
BBS4Q96RK4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.56■□□□□ 0.24
BBS4Q96RK4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.56■□□□□ 0.24
BBS4Q96RK4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.56■□□□□ 0.24
BBS4Q96RK4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
BBS4Q96RK4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BBS4Q96RK4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
BBS4Q96RK4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.56■□□□□ 0.24
BBS4Q96RK4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BBS4Q96RK4 MYCLP1-201ENST00000372451 1075 ntBASIC16.56■□□□□ 0.24
BBS4Q96RK4 FAM220CP-201ENST00000395253 831 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms